Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 Y_RNA.180-201ENST00000363867 113 ntBASIC1.56□□□□□ -2.16
NPIPB3Q92617 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.56□□□□□ -2.16
NPIPB3Q92617 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
NPIPB3Q92617 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.55□□□□□ -2.16
NPIPB3Q92617 SNORD115-28-201ENST00000363931 81 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 Y_RNA.337-201ENST00000365312 102 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 Y_RNA.441-201ENST00000384123 112 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 MIR548A2-201ENST00000384956 97 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 MIR518F-201ENST00000384973 87 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AL023284.1-201ENST00000403956 276 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AC074198.2-201ENST00000508153 258 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPB3Q92617 MIR5089-201ENST00000580047 84 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 AC134878.1-201ENST00000619901 243 ntBASIC1.55□□□□□ -2.16
NPIPB3Q92617 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NPIPB3Q92617 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NPIPB3Q92617 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
NPIPB3Q92617 RNU4-84P-201ENST00000364200 139 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SNORA1.2-201ENST00000365189 134 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 Y_RNA.521-201ENST00000384560 114 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 Y_RNA.542-201ENST00000384641 111 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 RNU6-239P-201ENST00000390990 99 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SUMO2P12-201ENST00000405924 140 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 RNU6-1135P-201ENST00000411083 103 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 RNU5E-9P-201ENST00000411164 104 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 AC087499.4-201ENST00000448505 178 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SNORD123-201ENST00000459473 70 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 RN7SL274P-201ENST00000492268 272 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 RNU4-57P-201ENST00000515980 135 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SNORA18.7-201ENST00000516910 131 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SNORA74.3-201ENST00000517108 154 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 AC007751.1-201ENST00000529260 376 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SCARNA15.3-201ENST00000626315 122 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 SCARNA4.1-201ENST00000628597 123 ntBASIC1.54□□□□□ -2.16
NPIPB3Q92617 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NPIPB3Q92617 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NPIPB3Q92617 RNU6-978P-201ENST00000364371 103 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 SNORA64-201ENST00000384674 134 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 SNORD41-201ENST00000386967 70 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 U8.17-201ENST00000391292 132 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.53□□□□□ -2.16
NPIPB3Q92617 AL356320.1-201ENST00000429616 163 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 RNU7-43P-201ENST00000516554 64 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.53□□□□□ -2.16
NPIPB3Q92617 SNRPGP19-201ENST00000603826 189 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 AC012493.3-201ENST00000604494 112 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 MIR219B-201ENST00000637023 88 ntBASIC1.53□□□□□ -2.16
NPIPB3Q92617 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NPIPB3Q92617 SNORA25.7-201ENST00000364375 127 ntBASIC1.52□□□□□ -2.17
NPIPB3Q92617 Y_RNA.393-201ENST00000383936 102 ntBASIC1.52□□□□□ -2.17
NPIPB3Q92617 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
NPIPB3Q92617 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
NPIPB3Q92617 AL365205.2-201ENST00000594586 68 ntBASIC1.52□□□□□ -2.17
NPIPB3Q92617 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
NPIPB3Q92617 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.52□□□□□ -2.17
NPIPB3Q92617 Y_RNA.37-201ENST00000362606 108 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 Y_RNA.272-201ENST00000364696 102 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 RNU6-597P-201ENST00000365620 102 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 Y_RNA.410-201ENST00000383992 113 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 Y_RNA.464-201ENST00000384282 110 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPB3Q92617 SNORD111.1-201ENST00000516421 86 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 MIR1273D-201ENST00000577266 86 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
NPIPB3Q92617 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.51□□□□□ -2.17
NPIPB3Q92617 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NPIPB3Q92617 RNU6-1292P-201ENST00000383856 107 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 SNORA1-201ENST00000384107 130 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 RNU6-1067P-201ENST00000384752 107 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 MIR634-201ENST00000385208 97 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPB3Q92617 AF228730.3-201ENST00000436691 102 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NPIPB3Q92617 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 RNU7-181P-201ENST00000517234 74 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPB3Q92617 MIR3129-201ENST00000581095 76 ntBASIC1.5□□□□□ -2.17
NPIPB3Q92617 SNORD115-34-201ENST00000362441 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 RNU4-82P-201ENST00000362443 140 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-12-201ENST00000362583 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-29-201ENST00000362834 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-9-201ENST00000362912 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-21-201ENST00000362963 81 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-14-201ENST00000363090 81 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-13-201ENST00000363358 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-41-201ENST00000363608 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-11-201ENST00000363616 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-5-201ENST00000363633 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-39-201ENST00000363694 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-4-201ENST00000363810 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-16-201ENST00000363887 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-6-201ENST00000363942 82 ntBASIC1.49□□□□□ -2.17
NPIPB3Q92617 SNORD115-42-201ENST00000364273 82 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms