Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SNORD115-3-201ENST00000363100 82 ntBASIC3.68□□□□□ -1.82
PTCD2Q8WV60 MIR449B-201ENST00000384995 97 ntBASIC3.68□□□□□ -1.82
PTCD2Q8WV60 AC026403.1-201ENST00000518938 295 ntBASIC3.68□□□□□ -1.82
PTCD2Q8WV60 MIR3134-201ENST00000579433 74 ntBASIC3.68□□□□□ -1.82
PTCD2Q8WV60 MIR8055-201ENST00000610739 97 ntBASIC3.68□□□□□ -1.82
PTCD2Q8WV60 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 RNA5SP42-201ENST00000364278 115 ntBASIC3.67□□□□□ -1.82
PTCD2Q8WV60 RNU6-686P-201ENST00000364839 107 ntBASIC3.67□□□□□ -1.82
PTCD2Q8WV60 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
PTCD2Q8WV60 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
PTCD2Q8WV60 AC009093.8-201ENST00000641769 292 ntBASIC3.67□□□□□ -1.82
PTCD2Q8WV60 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PTCD2Q8WV60 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCD2Q8WV60 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
PTCD2Q8WV60 MIR7-3-201ENST00000384898 110 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PTCD2Q8WV60 SCARNA18B-201ENST00000458806 135 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 SNORD4B-201ENST00000459083 72 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 RNU6-557P-201ENST00000516842 110 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 MIR4738-201ENST00000579134 87 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 SNORA51-201ENST00000606420 132 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 MIR8066-201ENST00000617280 78 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
PTCD2Q8WV60 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTCD2Q8WV60 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCD2Q8WV60 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTCD2Q8WV60 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTCD2Q8WV60 MIRLET7A1-201ENST00000362295 80 ntBASIC3.65□□□□□ -1.83
PTCD2Q8WV60 SNORD46.1-201ENST00000364139 104 ntBASIC3.65□□□□□ -1.83
PTCD2Q8WV60 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCD2Q8WV60 RNU6-917P-201ENST00000516294 104 ntBASIC3.65□□□□□ -1.83
PTCD2Q8WV60 SNORA70.18-201ENST00000516696 98 ntBASIC3.65□□□□□ -1.83
PTCD2Q8WV60 MIR8065-201ENST00000620577 100 ntBASIC3.65□□□□□ -1.83
PTCD2Q8WV60 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTCD2Q8WV60 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCD2Q8WV60 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCD2Q8WV60 AC008163.1-202ENST00000636004 2889 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 SNORA70.4-201ENST00000365509 134 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 RPS29P12-201ENST00000460178 152 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 AC026271.5-201ENST00000577873 130 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 MIR5094-201ENST00000578766 85 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 AP003355.3-201ENST00000623465 114 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 AC022513.1-201ENST00000624512 117 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD2Q8WV60 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD2Q8WV60 AC093010.3-201ENST00000570269 15214 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 MAPK10-322ENST00000641485 4530 ntBASIC3.64□□□□□ -1.83
PTCD2Q8WV60 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCD2Q8WV60 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PTCD2Q8WV60 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 SNORA25.9-201ENST00000365087 128 ntBASIC3.63□□□□□ -1.83
PTCD2Q8WV60 RNU1-109P-201ENST00000383960 147 ntBASIC3.63□□□□□ -1.83
PTCD2Q8WV60 Y_RNA.508-201ENST00000384502 114 ntBASIC3.63□□□□□ -1.83
PTCD2Q8WV60 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
PTCD2Q8WV60 RN7SL594P-201ENST00000470590 287 ntBASIC3.63□□□□□ -1.83
PTCD2Q8WV60 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCD2Q8WV60 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCD2Q8WV60 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCD2Q8WV60 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTCD2Q8WV60 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCD2Q8WV60 SNORD9-201ENST00000362566 104 ntBASIC3.62□□□□□ -1.83
PTCD2Q8WV60 RNU6-1031P-201ENST00000384773 107 ntBASIC3.62□□□□□ -1.83
PTCD2Q8WV60 RNU6-1237P-201ENST00000384777 107 ntBASIC3.62□□□□□ -1.83
PTCD2Q8WV60 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCD2Q8WV60 RPS29P11-201ENST00000496507 171 ntBASIC3.62□□□□□ -1.83
PTCD2Q8WV60 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCD2Q8WV60 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCD2Q8WV60 MIR208A-201ENST00000362287 71 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 SNORA63.2-201ENST00000362603 126 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 RNA5SP133-201ENST00000363368 119 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 RPL23AP6-201ENST00000446637 472 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCD2Q8WV60 CYP3A52P-201ENST00000563326 91 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 AC133485.1-201ENST00000567176 124 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 AL512598.1-201ENST00000610158 273 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 Z97988.1-201ENST00000637697 135 ntBASIC3.61□□□□□ -1.83
PTCD2Q8WV60 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCD2Q8WV60 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCD2Q8WV60 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms