Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNY3P15-201ENST00000516297 97 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RNU11-2P-201ENST00000516898 142 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 AP003716.2-201ENST00000528260 108 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.94□□□□□ -2.26
PRPF39Q86UA1 C8orf59P2-201ENST00000603441 271 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.94□□□□□ -2.26
PRPF39Q86UA1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.93□□□□□ -2.26
PRPF39Q86UA1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 SNORA1.2-201ENST00000365189 134 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 MIR570-201ENST00000384917 97 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.93□□□□□ -2.26
PRPF39Q86UA1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.93□□□□□ -2.26
PRPF39Q86UA1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.93□□□□□ -2.26
PRPF39Q86UA1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.93□□□□□ -2.26
PRPF39Q86UA1 SNORD11-201ENST00000459124 84 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 SCARNA8-201ENST00000515924 131 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 RNU6-830P-201ENST00000516353 107 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 RNU7-181P-201ENST00000517234 74 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 AC022709.1-201ENST00000615967 87 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 AC134503.1-201ENST00000633048 54 ntBASIC0.93□□□□□ -2.26
PRPF39Q86UA1 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 MIR367-201ENST00000362299 68 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 RNU6-290P-201ENST00000365212 101 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 SNORA51.10-201ENST00000384418 136 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 RNA5SP255-201ENST00000516370 107 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 RNU6-197P-201ENST00000516680 100 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 MTND4P29-201ENST00000503122 1372 ntBASIC0.92□□□□□ -2.26
PRPF39Q86UA1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.92□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 RNY1-201ENST00000364228 113 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 MTCO2P12-201ENST00000427426 682 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 SNRPGP14-201ENST00000435400 219 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
PRPF39Q86UA1 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 RNU2-31P-201ENST00000516954 155 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 AC012433.1-201ENST00000588916 398 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 MIR6515-201ENST00000619843 57 ntBASIC0.91□□□□□ -2.26
PRPF39Q86UA1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
PRPF39Q86UA1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.61-201ENST00000362835 102 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 SNORA22B-201ENST00000383876 138 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 SNORD89-201ENST00000390981 114 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 AL603910.2-201ENST00000407268 136 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 SNORD111-201ENST00000408139 94 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 MIR548P-201ENST00000408336 84 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 AC131281.1-201ENST00000522984 164 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 AC006441.5-201ENST00000612680 209 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 AC013791.1-201ENST00000616619 62 ntBASIC0.9□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.105-201ENST00000363182 111 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 RNU6-770P-201ENST00000363929 105 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.535-201ENST00000384612 99 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 RNU6-383P-201ENST00000410864 94 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 BTF3P11-201ENST00000426582 477 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 MIR2115-201ENST00000516657 100 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 MIR4724-201ENST00000579485 89 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 RNU6-94P-201ENST00000607728 107 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 7SK.10-201ENST00000621414 298 ntBASIC0.89□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 RNU6-396P-201ENST00000365369 105 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.394-201ENST00000383942 103 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 AC107297.1-201ENST00000459991 176 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.88□□□□□ -2.27
PRPF39Q86UA1 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 AL049861.1-201ENST00000603130 150 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 AL355297.3-201ENST00000604082 446 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 FAM71BP1-201ENST00000604431 523 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 AL136317.1-201ENST00000612653 226 ntBASIC0.88□□□□□ -2.27
PRPF39Q86UA1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNU6-654P-201ENST00000364373 107 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNU6-326P-201ENST00000365480 107 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNA5SP496-201ENST00000391240 109 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNU6-121P-201ENST00000410525 99 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNU6-847P-201ENST00000411115 108 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 U7.7-201ENST00000459276 60 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 AC098869.1-201ENST00000481627 292 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 RNU6-1143P-201ENST00000516125 104 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.711-201ENST00000516993 102 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 AC036111.3-201ENST00000526389 112 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 MIR5692C2-201ENST00000577959 77 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 MIR4791-201ENST00000607666 84 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 MIR6516-201ENST00000630554 81 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 AL442644.1-201ENST00000454390 3105 ntBASIC0.87□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms