Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNA5SP137-201ENST00000516833 135 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 RNU6-365P-201ENST00000517113 106 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AC090142.3-201ENST00000519012 385 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AC026271.5-201ENST00000577873 130 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 MIR3121-201ENST00000579680 77 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 SNORD115-3-201ENST00000363100 82 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 SNORD50B-201ENST00000364995 70 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 MIR891A-201ENST00000401237 79 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 RNU7-94P-201ENST00000459576 63 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 AL049830.1-201ENST00000468034 425 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 SNORA31.25-201ENST00000517242 134 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 AC005786.1-201ENST00000588553 154 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.8□□□□□ -2.12
ZNF549Q6P9A3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 RNU6-215P-201ENST00000365169 102 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 SNORD24-201ENST00000383884 75 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MIR518F-201ENST00000384973 87 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MIR29C-201ENST00000385231 88 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MLLT10P1-201ENST00000418346 262 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 HMGN2P3-201ENST00000433603 273 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 HMGN2P5-201ENST00000436882 273 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 RNA5SP236-201ENST00000516169 116 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 SNORA31.10-201ENST00000516482 106 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 AC087685.1-201ENST00000587507 141 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 AC078899.2-201ENST00000595282 212 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MIR7843-201ENST00000622274 79 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 MIR376A2-201ENST00000636782 80 ntBASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZNF549Q6P9A3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 RNU6-309P-201ENST00000364573 106 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 SNORD20-201ENST00000384550 80 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 AL603914.1-201ENST00000401964 204 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 RNA5SP127-201ENST00000411051 133 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 AC245047.3-201ENST00000429428 127 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 RNU6-504P-201ENST00000516568 104 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 AC084364.2-201ENST00000546924 395 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 MIR3129-201ENST00000581095 76 ntBASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
ZNF549Q6P9A3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
ZNF549Q6P9A3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
ZNF549Q6P9A3 AL359851.1-201ENST00000569460 4997 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AL442644.1-201ENST00000454390 3105 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 MIRLET7C-201ENST00000362160 84 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 RNU6-235P-201ENST00000362644 107 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.81-201ENST00000362997 102 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 SNORD77.3-201ENST00000391113 65 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 RNU2-19P-201ENST00000517288 84 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 MIR3124-201ENST00000582636 67 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AC006441.5-201ENST00000612680 209 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 MTND5P32-201ENST00000560711 1802 ntBASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZNF549Q6P9A3 SNORD68-201ENST00000363214 84 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 HMGN2P39-201ENST00000398005 273 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 AL158147.1-201ENST00000443970 75 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 SCARNA15-202ENST00000516881 127 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.76□□□□□ -2.13
ZNF549Q6P9A3 RNU6-268P-201ENST00000364174 107 ntBASIC1.75□□□□□ -2.13
ZNF549Q6P9A3 SNORA63D-201ENST00000364359 132 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms