Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 MIR524-201ENST00000385242 87 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 MIR548A3-201ENST00000385297 97 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 SNORA48.3-201ENST00000391081 134 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 MIR1261-201ENST00000408659 82 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 RNU6-938P-201ENST00000411285 103 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 SNRPGP13-201ENST00000442212 177 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 AL049830.1-201ENST00000468034 425 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 RNU1-142P-201ENST00000516682 145 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 AC024995.1-201ENST00000523014 93 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 MIR5197-201ENST00000583721 112 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 AC087685.1-201ENST00000587507 141 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 AC006441.5-201ENST00000612680 209 ntBASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF260Q3ZCT1 Y_RNA.43-201ENST00000362670 111 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 Y_RNA.366-201ENST00000365540 102 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 BX510359.4-201ENST00000423750 193 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 AL356320.1-201ENST00000429616 163 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 Y_RNA.649-201ENST00000459077 103 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 AP002004.2-201ENST00000531656 154 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 MIR6840-201ENST00000611937 71 ntBASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF260Q3ZCT1 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNU6-23P-201ENST00000363283 107 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNU6-268P-201ENST00000364174 107 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNU6-880P-201ENST00000384526 107 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP89-201ENST00000410300 108 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP425-201ENST00000410336 112 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP270-201ENST00000411361 118 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 RNU7-25P-201ENST00000516544 62 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 MIR4679-2-201ENST00000578358 77 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 AC104984.5-201ENST00000586878 94 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.84□□□□□ -2.11
ZNF260Q3ZCT1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ZNF260Q3ZCT1 ZNF658B-202ENST00000615961 3375 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIRLET7C-201ENST00000362160 84 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.346-201ENST00000365385 112 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIR518A2-201ENST00000384966 87 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNU11-3P-201ENST00000391111 133 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIR548O-201ENST00000408583 114 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 Z98742.3-201ENST00000418637 326 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MTATP6P21-201ENST00000440681 189 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNU6-113P-201ENST00000516653 101 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 RNA5SP170-201ENST00000517150 101 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIR3124-201ENST00000582636 67 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 MIR6715A-201ENST00000615929 79 ntBASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZNF260Q3ZCT1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RNU6-349P-201ENST00000362402 107 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RNU6-106P-201ENST00000384405 107 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.549-201ENST00000384657 102 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 MIR515-2-201ENST00000384883 83 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 MIR515-1-201ENST00000384884 83 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 MT-TI-201ENST00000387365 69 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 SNORA3.2-201ENST00000408221 125 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 MIR1263-201ENST00000408324 86 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RPS26P48-201ENST00000491713 339 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 SNORA31.4-201ENST00000516049 129 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RNU6-168P-201ENST00000516189 101 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 SNORA31.10-201ENST00000516482 106 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 RNA5SP281-201ENST00000516504 135 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 uc_338.28-201ENST00000612082 187 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 AL121890.5-201ENST00000620848 304 ntBASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZNF260Q3ZCT1 AC245060.5-201ENST00000610778 3293 ntBASIC1.81□□□□□ -2.12
ZNF260Q3ZCT1 AC008555.8-201ENST00000623602 2168 ntBASIC1.81□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
ZNF260Q3ZCT1 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
ZNF260Q3ZCT1 Y_RNA.528-201ENST00000384575 108 ntBASIC1.81□□□□□ -2.12
ZNF260Q3ZCT1 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms