Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
VAMP1P23763 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.22□□□□□ -2.05
VAMP1P23763 AC039056.2-201ENST00000622261 511 ntBASIC2.22□□□□□ -2.05
VAMP1P23763 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.22□□□□□ -2.05
VAMP1P23763 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
VAMP1P23763 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
VAMP1P23763 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
VAMP1P23763 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.22□□□□□ -2.05
VAMP1P23763 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 Y_RNA.52-201ENST00000362760 96 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 RNU1-133P-201ENST00000364867 167 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 Y_RNA.440-201ENST00000384120 114 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 SNORD28B-201ENST00000390993 75 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 RPS12P2-201ENST00000439728 269 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 PRSS3P4-201ENST00000453323 162 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 RNU7-96P-201ENST00000459535 64 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 RPS26P48-201ENST00000491713 339 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 RNU7-53P-201ENST00000516705 60 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 AP001328.1-201ENST00000528550 176 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.21□□□□□ -2.06
VAMP1P23763 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 AP001485.1-201ENST00000604799 199 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
VAMP1P23763 MTND5P32-201ENST00000560711 1802 ntBASIC2.21□□□□□ -2.06
VAMP1P23763 AL596211.1-201ENST00000569873 2277 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAMP1P23763 MIR570-201ENST00000384917 97 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 RNA5SP171-201ENST00000391071 115 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 RNU1-78P-201ENST00000391248 165 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 RNU6-938P-201ENST00000411285 103 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.2□□□□□ -2.06
VAMP1P23763 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 RNU6-426P-201ENST00000516464 97 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 RNU6-958P-201ENST00000516995 106 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 MIR5092-201ENST00000583139 88 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 AC243994.1-201ENST00000618627 109 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 AC008133.2-201ENST00000624540 351 ntBASIC2.2□□□□□ -2.06
VAMP1P23763 Y_RNA.420-201ENST00000384043 110 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 SNORA20-201ENST00000384662 132 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 RNU6-460P-201ENST00000391158 108 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VAMP1P23763 AC005326.1-201ENST00000429197 123 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 RPS29P29-201ENST00000456396 171 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 MIR4791-201ENST00000607666 84 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 MIR7112-201ENST00000616126 65 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 AL121890.5-201ENST00000620848 304 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
VAMP1P23763 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VAMP1P23763 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 Y_RNA.537-201ENST00000384626 109 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 MIR569-201ENST00000385228 96 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 MIR613-201ENST00000385248 95 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 AL035398.1-201ENST00000430869 322 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 AC027119.1-201ENST00000440877 241 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 RNA5SP445-201ENST00000515889 115 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 RN7SKP57-201ENST00000517248 293 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 Y_RNA.757-201ENST00000578934 114 ntBASIC2.18□□□□□ -2.06
VAMP1P23763 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VAMP1P23763 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VAMP1P23763 MIR302D-201ENST00000362275 68 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 RNU6-915P-201ENST00000364943 103 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 SNORD41-201ENST00000386967 70 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 Y_RNA.690-201ENST00000516603 95 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 SNORA70.24-201ENST00000517233 118 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 AC011603.4-201ENST00000611325 277 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 AC012314.7-201ENST00000619693 93 ntBASIC2.17□□□□□ -2.06
VAMP1P23763 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.17□□□□□ -2.06
VAMP1P23763 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.17□□□□□ -2.06
VAMP1P23763 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.16□□□□□ -2.06
VAMP1P23763 Y_RNA.120-201ENST00000363304 110 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 RNA5SP48-201ENST00000363969 126 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 RNU6-187P-201ENST00000384139 106 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 SNORA40-201ENST00000388090 126 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.16□□□□□ -2.06
VAMP1P23763 AC245517.4-201ENST00000448601 281 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 Y_RNA.692-201ENST00000516627 105 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 MIR4251-201ENST00000635819 61 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 AC010332.2-201ENST00000613083 1904 ntBASIC2.16□□□□□ -2.06
VAMP1P23763 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.06
VAMP1P23763 U8.1-201ENST00000362843 134 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 MIR634-201ENST00000385208 97 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.15□□□□□ -2.07
VAMP1P23763 RNU2-11P-201ENST00000459191 187 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 RNA5SP272-201ENST00000516095 111 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 RN7SKP88-201ENST00000516847 250 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 MIR5195-201ENST00000583555 115 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 7SK.8-201ENST00000612110 250 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 7SK.11-201ENST00000615477 250 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 7SK.13-201ENST00000622040 250 ntBASIC2.15□□□□□ -2.07
VAMP1P23763 AL138827.1-201ENST00000402666 306 ntBASIC2.14□□□□□ -2.07
VAMP1P23763 RNU6-998P-201ENST00000515894 101 ntBASIC2.14□□□□□ -2.07
VAMP1P23763 RNA5SP281-201ENST00000516504 135 ntBASIC2.14□□□□□ -2.07
VAMP1P23763 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
VAMP1P23763 TUG1_4.1-201ENST00000619464 181 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 442.9 ms