Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FAM71BP1-201ENST00000604431 523 ntBASIC2.92□□□□□ -1.94
NFKB1P19838 AC069114.2-201ENST00000604699 304 ntBASIC2.92□□□□□ -1.94
NFKB1P19838 AL590808.1-201ENST00000618696 141 ntBASIC2.92□□□□□ -1.94
NFKB1P19838 AC095038.3-201ENST00000634439 195 ntBASIC2.92□□□□□ -1.94
NFKB1P19838 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NFKB1P19838 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NFKB1P19838 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NFKB1P19838 RNU6-573P-201ENST00000383938 106 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 Y_RNA.531-201ENST00000384589 121 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 RNU6-592P-201ENST00000411333 103 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 AC015922.2-201ENST00000435593 184 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 AL445687.1-201ENST00000439946 251 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.91□□□□□ -1.94
NFKB1P19838 IGLV3-17-201ENST00000519099 244 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 MIR4325-201ENST00000583049 90 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.91□□□□□ -1.94
NFKB1P19838 AL449363.1-201ENST00000617815 186 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 MIR203B-201ENST00000636080 86 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 MIR1255B1-201ENST00000636325 63 ntBASIC2.91□□□□□ -1.94
NFKB1P19838 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NFKB1P19838 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NFKB1P19838 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
NFKB1P19838 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NFKB1P19838 AC096644.4-201ENST00000563417 2912 ntBASIC2.9□□□□□ -1.94
NFKB1P19838 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NFKB1P19838 AC092881.1-201ENST00000638218 2733 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.9□□□□□ -1.95
NFKB1P19838 RNU6-363P-201ENST00000362895 105 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 RNU6-1019P-201ENST00000364424 107 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 POLR2J4-204ENST00000418424 324 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 RNU6-56P-201ENST00000516986 93 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 Y_RNA.773-201ENST00000607168 90 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 MIR6852-201ENST00000621699 66 ntBASIC2.9□□□□□ -1.95
NFKB1P19838 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
NFKB1P19838 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 MIR494-201ENST00000349529 81 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 RNU1-58P-201ENST00000362413 163 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 Y_RNA.155-201ENST00000363632 101 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 Y_RNA.290-201ENST00000364879 114 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 Y_RNA.299-201ENST00000364973 94 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 Y_RNA.360-201ENST00000365512 102 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 RNU6-851P-201ENST00000384565 107 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 AC096949.1-201ENST00000412047 152 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 RNU2-11P-201ENST00000459191 187 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.89□□□□□ -1.95
NFKB1P19838 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.89□□□□□ -1.95
NFKB1P19838 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NFKB1P19838 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NFKB1P19838 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.88□□□□□ -1.95
NFKB1P19838 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
NFKB1P19838 SNORD115-3-201ENST00000363100 82 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU6-832P-201ENST00000363319 107 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU6-833P-201ENST00000363486 107 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU4-67P-201ENST00000364569 141 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 SNORA4.2-201ENST00000365313 147 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU6-409P-201ENST00000384114 104 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 MIR577-201ENST00000385196 96 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NFKB1P19838 MIR1267-201ENST00000408723 78 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU6-733P-201ENST00000410759 104 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 AL139132.1-201ENST00000431587 344 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 HSPE1P9-201ENST00000440046 311 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 Y_RNA.685-201ENST00000516532 108 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 RNU7-181P-201ENST00000517234 74 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 AL513534.2-201ENST00000603836 250 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.88□□□□□ -1.95
NFKB1P19838 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NFKB1P19838 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NFKB1P19838 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NFKB1P19838 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NFKB1P19838 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NFKB1P19838 MIR29C-201ENST00000385231 88 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 Y_RNA.593-201ENST00000410292 98 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 AC004941.2-201ENST00000427009 228 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.87□□□□□ -1.95
NFKB1P19838 AC069257.2-201ENST00000441819 155 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 AL135938.1-201ENST00000443141 297 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 AC064859.1-201ENST00000624741 174 ntBASIC2.87□□□□□ -1.95
NFKB1P19838 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
NFKB1P19838 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NFKB1P19838 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NFKB1P19838 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NFKB1P19838 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NFKB1P19838 RNY1P10-201ENST00000363268 113 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 Y_RNA.219-201ENST00000364232 113 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NFKB1P19838 SNORA44-201ENST00000384584 132 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 U8.16-201ENST00000391279 133 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 AL034345.1-201ENST00000407768 123 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms