Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 SNORA31.14-201ENST00000516728 116 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 MIR4752-201ENST00000579672 72 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 MIR4423-201ENST00000580922 80 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBBP0CG47 MIR548AY-201ENST00000617669 107 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 MIR330-201ENST00000362196 94 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 RNY3P4-201ENST00000384428 101 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 SNORD28-201ENST00000384706 75 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 SNORD12C-201ENST00000386307 89 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 MIR548O-201ENST00000408583 114 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 FCF1P4-201ENST00000448326 183 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 snoU13.18-201ENST00000459483 104 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 RPL39P34-201ENST00000477141 156 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 RNU6-469P-201ENST00000516253 101 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBBP0CG47 MIR4790-201ENST00000577799 79 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 RN7SL793P-201ENST00000583259 296 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBBP0CG47 AC245008.1-201ENST00000608123 476 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 AC091304.10-201ENST00000641554 121 ntBASIC-0.34□□□□□ -2.46
UBBP0CG47 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 SNORD81.1-201ENST00000363064 77 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RNU6-626P-201ENST00000363354 107 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RNU6-593P-201ENST00000364716 112 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RNU6-302P-201ENST00000365249 107 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 MIR501-201ENST00000390204 84 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 MIR548K-201ENST00000408406 116 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RNU6-710P-201ENST00000410424 105 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.35□□□□□ -2.47
UBBP0CG47 RNU7-159P-201ENST00000459284 62 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RPL7P42-201ENST00000481005 679 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 RN7SKP299-201ENST00000606679 301 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.35□□□□□ -2.47
UBBP0CG47 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU6-514P-201ENST00000384208 107 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU4-83P-201ENST00000410863 133 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU6-373P-201ENST00000411247 98 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.36□□□□□ -2.47
UBBP0CG47 MTND1P2-201ENST00000430604 821 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 MTCO1P5-201ENST00000433573 344 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 POLR2KP2-201ENST00000438155 177 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 MTND4LP16-201ENST00000440828 295 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU7-67P-201ENST00000459003 62 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU6-437P-201ENST00000459408 95 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 AC104692.1-201ENST00000472406 90 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RPS29P25-201ENST00000481709 171 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU6-135P-201ENST00000516769 101 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 RNU6-958P-201ENST00000516995 106 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.36□□□□□ -2.47
UBBP0CG47 MIR4639-201ENST00000584938 69 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 AC124312.5-201ENST00000604451 268 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.36□□□□□ -2.47
UBBP0CG47 AC011476.5-201ENST00000615594 130 ntBASIC-0.36□□□□□ -2.47
UBBP0CG47 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 RNU6V-201ENST00000384105 107 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.37□□□□□ -2.47
UBBP0CG47 RNU6-765P-201ENST00000516916 99 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 DEFB117-201ENST00000602356 141 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 AL021707.8-201ENST00000609428 183 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 MIR6082-201ENST00000613604 109 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 AC022140.2-201ENST00000623500 188 ntBASIC-0.37□□□□□ -2.47
UBBP0CG47 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 RNU6-99P-201ENST00000364721 107 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 RNU6-291P-201ENST00000384720 107 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 SNORD78.2-201ENST00000391076 69 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 RNA5SP118-201ENST00000410385 109 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 MTND3P10-201ENST00000450967 341 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 MIR2053-201ENST00000459295 91 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC107297.1-201ENST00000459991 176 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 RN7SKP295-201ENST00000517264 153 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC109635.3-201ENST00000529536 185 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.38□□□□□ -2.47
UBBP0CG47 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC138869.1-201ENST00000568623 124 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC006600.1-201ENST00000572529 153 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 MIR2681-201ENST00000581814 105 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC005730.3-201ENST00000583067 366 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 MIR548AD-201ENST00000584780 82 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AC005357.1-201ENST00000588399 301 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 AP001282.2-201ENST00000616149 309 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 MIR3974-201ENST00000637126 96 ntBASIC-0.38□□□□□ -2.47
UBBP0CG47 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
UBBP0CG47 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.39□□□□□ -2.47
UBBP0CG47 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.39□□□□□ -2.47
UBBP0CG47 SNORA1.1-201ENST00000364671 133 ntBASIC-0.39□□□□□ -2.47
UBBP0CG47 MIR193B-201ENST00000384907 83 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms