Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 Y_RNA.509-201ENST00000384506 99 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 Y_RNA.569-201ENST00000384749 103 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 RNU6-763P-201ENST00000390865 106 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 SNORD115-46-201ENST00000390982 71 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 MTND4LP11-201ENST00000422184 280 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 SNORD11-201ENST00000459124 84 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 RNU6-496P-201ENST00000516145 99 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 RNU6-830P-201ENST00000516353 107 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 RNU6-764P-201ENST00000516396 105 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.68□□□□□ -2.3
TRIM3O75382 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.68□□□□□ -2.3
TRIM3O75382 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
TRIM3O75382 Y_RNA.105-201ENST00000363182 111 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 RNU6-899P-201ENST00000363947 107 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 RNU6-474P-201ENST00000384243 107 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 RNU6-383P-201ENST00000410864 94 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.67□□□□□ -2.3
TRIM3O75382 AC068700.1-201ENST00000565862 3754 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 MTND4P29-201ENST00000503122 1372 ntBASIC0.67□□□□□ -2.3
TRIM3O75382 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
TRIM3O75382 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
TRIM3O75382 Y_RNA.269-201ENST00000364685 89 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 SNORA63.7-201ENST00000365579 123 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 SNORA51.10-201ENST00000384418 136 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 RNU6-101P-201ENST00000410323 104 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.66□□□□□ -2.3
TRIM3O75382 MTCO1P5-201ENST00000433573 344 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 RNU11-2P-201ENST00000516898 142 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
TRIM3O75382 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRIM3O75382 Y_RNA.28-201ENST00000362554 111 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 RNU4-90P-201ENST00000362773 141 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 Y_RNA.136-201ENST00000363444 102 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 RNU6-1205P-201ENST00000363625 106 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 SNORD113.3-201ENST00000364630 78 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 Y_RNA.394-201ENST00000383942 103 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 MIR1252-201ENST00000408861 65 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 RNU6-121P-201ENST00000410525 99 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 AC005534.2-201ENST00000431047 433 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 AC098869.1-201ENST00000481627 292 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 C8orf59P2-201ENST00000603441 271 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 AC006441.5-201ENST00000612680 209 ntBASIC0.65□□□□□ -2.31
TRIM3O75382 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 Y_RNA.370-201ENST00000365589 108 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 RNU6-1067P-201ENST00000384752 107 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 Y_RNA.637-201ENST00000459424 114 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 RNU4-57P-201ENST00000515980 135 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 RNU6-1007P-201ENST00000516586 107 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.64□□□□□ -2.31
TRIM3O75382 MIR548AO-201ENST00000579992 96 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 AL512605.2-201ENST00000592972 256 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 MTND1P7-201ENST00000632801 297 ntBASIC0.64□□□□□ -2.31
TRIM3O75382 AC067940.1-201ENST00000458411 300 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 snoU13.18-201ENST00000459483 104 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 Y_RNA.631-201ENST00000459607 101 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 RNU7-25P-201ENST00000516544 62 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 MIR2115-201ENST00000516657 100 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 SNORA40.15-201ENST00000516884 107 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 RNU6-988P-201ENST00000519081 107 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 AP001094.1-201ENST00000579805 193 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 MIR4791-201ENST00000607666 84 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 AL160413.1-201ENST00000622780 310 ntBASIC0.63□□□□□ -2.31
TRIM3O75382 SNORA1.2-201ENST00000365189 134 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 RNU6-396P-201ENST00000365369 105 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 RNU6-144P-201ENST00000383951 107 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 Y_RNA.537-201ENST00000384626 109 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 MIR215-201ENST00000384858 110 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 Y_RNA.581-201ENST00000391017 97 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
TRIM3O75382 ELOCP20-201ENST00000422460 345 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AC023449.1-201ENST00000454464 154 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 RNY3P15-201ENST00000516297 97 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AL049861.1-201ENST00000603130 150 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AC013791.1-201ENST00000616619 62 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 AC022140.2-201ENST00000623500 188 ntBASIC0.62□□□□□ -2.31
TRIM3O75382 Y_RNA.14-201ENST00000362415 103 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU6-806P-201ENST00000365147 105 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms