Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 Y_RNA.649-201ENST00000459077 103 ntBASIC2.34□□□□□ -2.03
NPHS1O60500 RNU7-12P-201ENST00000516030 62 ntBASIC2.34□□□□□ -2.03
NPHS1O60500 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NPHS1O60500 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPHS1O60500 ZNF720P1-201ENST00000562403 1939 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 Y_RNA.35-201ENST00000362601 101 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 SNORA22-201ENST00000383907 134 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 SNORD116-21-201ENST00000384507 92 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 Y_RNA.528-201ENST00000384575 108 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 NDUFB4P4-201ENST00000404822 243 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 AC087499.4-201ENST00000448505 178 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
NPHS1O60500 RPS26P48-201ENST00000491713 339 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 SNORA18.7-201ENST00000516910 131 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 EIF4BP1-201ENST00000554881 351 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 GTF3AP2-201ENST00000557014 266 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
NPHS1O60500 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
NPHS1O60500 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NPHS1O60500 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPHS1O60500 RNU6-349P-201ENST00000362402 107 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 SNORA80A-201ENST00000363922 136 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHS1O60500 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 RNU7-70P-201ENST00000516941 66 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 SNORA31.25-201ENST00000517242 134 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 AL033523.1-201ENST00000605153 153 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 MIR7106-201ENST00000612419 65 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 AC006386.2-201ENST00000624491 75 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 AC012005.1-201ENST00000624575 75 ntBASIC2.32□□□□□ -2.04
NPHS1O60500 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.32□□□□□ -2.04
NPHS1O60500 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NPHS1O60500 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPHS1O60500 Y_RNA.351-201ENST00000365436 96 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 RNA5SP450-201ENST00000411206 102 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 AC063976.4-201ENST00000421971 163 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 RNU7-34P-201ENST00000459394 64 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 RNU6-830P-201ENST00000516353 107 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 AC021506.2-201ENST00000612354 169 ntBASIC2.31□□□□□ -2.04
NPHS1O60500 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.31□□□□□ -2.04
NPHS1O60500 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPHS1O60500 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPHS1O60500 RNU6-690P-201ENST00000365242 106 ntBASIC2.3□□□□□ -2.04
NPHS1O60500 Y_RNA.494-201ENST00000384432 111 ntBASIC2.3□□□□□ -2.04
NPHS1O60500 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
NPHS1O60500 RNU7-181P-201ENST00000517234 74 ntBASIC2.3□□□□□ -2.04
NPHS1O60500 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.3□□□□□ -2.04
NPHS1O60500 MIR203B-201ENST00000636080 86 ntBASIC2.3□□□□□ -2.04
NPHS1O60500 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPHS1O60500 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 AL596211.1-201ENST00000569873 2277 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 Y_RNA.241-201ENST00000364470 117 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 RNU1-133P-201ENST00000364867 167 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 MIR516B2-201ENST00000385190 85 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 MIR634-201ENST00000385208 97 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 RNA5SP136-201ENST00000410906 107 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHS1O60500 snoU13.27-201ENST00000459278 104 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 AC099513.1-201ENST00000490423 301 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHS1O60500 MIR4709-201ENST00000577272 72 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 AC091932.4-201ENST00000623386 200 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 SCARNA15.3-201ENST00000626315 122 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 SCARNA4.1-201ENST00000628597 123 ntBASIC2.29□□□□□ -2.04
NPHS1O60500 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPHS1O60500 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NPHS1O60500 AL442644.1-201ENST00000454390 3105 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 MIR342-201ENST00000362212 99 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNU6-755P-201ENST00000364400 103 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNY1P6-201ENST00000384193 109 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNU6-880P-201ENST00000384526 107 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNA5SP184-201ENST00000411071 108 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 SNX2P2-201ENST00000424553 323 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHS1O60500 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHS1O60500 RNA5SP356-201ENST00000515972 94 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 RNA5SP481-201ENST00000516814 122 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 U1.36-201ENST00000620684 176 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
NPHS1O60500 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPHS1O60500 AC062016.1-201ENST00000355719 319 ntBASIC2.27□□□□□ -2.05
NPHS1O60500 SNORA27-201ENST00000384323 126 ntBASIC2.27□□□□□ -2.05
NPHS1O60500 AL627390.1-201ENST00000396055 340 ntBASIC2.27□□□□□ -2.05
NPHS1O60500 RNU7-80P-201ENST00000459562 61 ntBASIC2.27□□□□□ -2.05
NPHS1O60500 COX6CP6-201ENST00000490840 228 ntBASIC2.27□□□□□ -2.05
NPHS1O60500 RNY4P20-201ENST00000516678 93 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms