Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RNU6-379P-201ENST00000363813 104 ntBASIC1.22□□□□□ -2.21
PHF1O43189 SNORA20.1-201ENST00000364790 130 ntBASIC1.22□□□□□ -2.21
PHF1O43189 RNA5SP496-201ENST00000391240 109 ntBASIC1.22□□□□□ -2.21
PHF1O43189 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
PHF1O43189 U8.16-201ENST00000391279 133 ntBASIC1.22□□□□□ -2.21
PHF1O43189 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
PHF1O43189 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
PHF1O43189 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.22□□□□□ -2.21
PHF1O43189 RNA5SP168-201ENST00000516642 112 ntBASIC1.22□□□□□ -2.21
PHF1O43189 RNU6-1271P-201ENST00000517049 105 ntBASIC1.22□□□□□ -2.21
PHF1O43189 RNU6-1223P-201ENST00000517124 104 ntBASIC1.22□□□□□ -2.21
PHF1O43189 AC006006.1-201ENST00000603082 144 ntBASIC1.22□□□□□ -2.21
PHF1O43189 Y_RNA.802-201ENST00000614892 130 ntBASIC1.22□□□□□ -2.21
PHF1O43189 AL365265.1-201ENST00000621045 234 ntBASIC1.22□□□□□ -2.21
PHF1O43189 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PHF1O43189 AC245060.5-201ENST00000610778 3293 ntBASIC1.22□□□□□ -2.21
PHF1O43189 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
PHF1O43189 RNU6-414P-201ENST00000363705 104 ntBASIC1.21□□□□□ -2.22
PHF1O43189 SNORA8.3-201ENST00000384679 139 ntBASIC1.21□□□□□ -2.22
PHF1O43189 SNRPGP10-201ENST00000432323 225 ntBASIC1.21□□□□□ -2.22
PHF1O43189 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
PHF1O43189 CYCTP-201ENST00000504253 315 ntBASIC1.21□□□□□ -2.22
PHF1O43189 MIR4724-201ENST00000579485 89 ntBASIC1.21□□□□□ -2.22
PHF1O43189 AC141273.2-201ENST00000618989 130 ntBASIC1.21□□□□□ -2.22
PHF1O43189 RNU6-833P-201ENST00000363486 107 ntBASIC1.2□□□□□ -2.22
PHF1O43189 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
PHF1O43189 RNU6-381P-201ENST00000391259 108 ntBASIC1.2□□□□□ -2.22
PHF1O43189 MIR1267-201ENST00000408723 78 ntBASIC1.2□□□□□ -2.22
PHF1O43189 RNU6-383P-201ENST00000410864 94 ntBASIC1.2□□□□□ -2.22
PHF1O43189 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
PHF1O43189 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.2□□□□□ -2.22
PHF1O43189 SNRPGP14-201ENST00000435400 219 ntBASIC1.2□□□□□ -2.22
PHF1O43189 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.2□□□□□ -2.22
PHF1O43189 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
PHF1O43189 snoU13.9-201ENST00000458927 103 ntBASIC1.2□□□□□ -2.22
PHF1O43189 Y_RNA.679-201ENST00000516416 91 ntBASIC1.2□□□□□ -2.22
PHF1O43189 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
PHF1O43189 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.2□□□□□ -2.22
PHF1O43189 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
PHF1O43189 AC120024.3-201ENST00000603167 156 ntBASIC1.2□□□□□ -2.22
PHF1O43189 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
PHF1O43189 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PHF1O43189 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
PHF1O43189 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PHF1O43189 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
PHF1O43189 snoU2_19.4-201ENST00000364329 80 ntBASIC1.19□□□□□ -2.22
PHF1O43189 RNU4-10P-201ENST00000364383 140 ntBASIC1.19□□□□□ -2.22
PHF1O43189 Y_RNA.262-201ENST00000364641 102 ntBASIC1.19□□□□□ -2.22
PHF1O43189 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
PHF1O43189 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.19□□□□□ -2.22
PHF1O43189 Y_RNA.626-201ENST00000411288 95 ntBASIC1.19□□□□□ -2.22
PHF1O43189 POLR2J4-204ENST00000418424 324 ntBASIC1.19□□□□□ -2.22
PHF1O43189 AC245047.8-201ENST00000456455 284 ntBASIC1.19□□□□□ -2.22
PHF1O43189 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
PHF1O43189 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PHF1O43189 RPL23AP91-201ENST00000569211 455 ntBASIC1.19□□□□□ -2.22
PHF1O43189 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
PHF1O43189 FAM106DP-201ENST00000586416 501 ntBASIC1.19□□□□□ -2.22
PHF1O43189 AP001485.1-201ENST00000604799 199 ntBASIC1.19□□□□□ -2.22
PHF1O43189 AL391903.3-201ENST00000612158 163 ntBASIC1.19□□□□□ -2.22
PHF1O43189 Y_RNA.65-201ENST00000362846 100 ntBASIC1.18□□□□□ -2.22
PHF1O43189 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
PHF1O43189 Y_RNA.229-201ENST00000364347 113 ntBASIC1.18□□□□□ -2.22
PHF1O43189 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
PHF1O43189 Y_RNA.293-201ENST00000364908 93 ntBASIC1.18□□□□□ -2.22
PHF1O43189 SNORD50B-201ENST00000364995 70 ntBASIC1.18□□□□□ -2.22
PHF1O43189 RNU6-1138P-201ENST00000365359 106 ntBASIC1.18□□□□□ -2.22
PHF1O43189 Y_RNA.435-201ENST00000384095 112 ntBASIC1.18□□□□□ -2.22
PHF1O43189 Y_RNA.476-201ENST00000384347 108 ntBASIC1.18□□□□□ -2.22
PHF1O43189 Y_RNA.572-201ENST00000384757 98 ntBASIC1.18□□□□□ -2.22
PHF1O43189 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
PHF1O43189 MIR616-201ENST00000385293 97 ntBASIC1.18□□□□□ -2.22
PHF1O43189 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.18□□□□□ -2.22
PHF1O43189 SNORD77.4-201ENST00000516158 81 ntBASIC1.18□□□□□ -2.22
PHF1O43189 RNU6-1116P-201ENST00000517269 99 ntBASIC1.18□□□□□ -2.22
PHF1O43189 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
PHF1O43189 JPX_2.1-201ENST00000614161 69 ntBASIC1.18□□□□□ -2.22
PHF1O43189 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
PHF1O43189 Y_RNA.24-201ENST00000362508 103 ntBASIC1.17□□□□□ -2.22
PHF1O43189 Y_RNA.200-201ENST00000364018 102 ntBASIC1.17□□□□□ -2.22
PHF1O43189 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
PHF1O43189 RNU4-17P-201ENST00000365598 141 ntBASIC1.17□□□□□ -2.22
PHF1O43189 RNY3P5-201ENST00000384127 102 ntBASIC1.17□□□□□ -2.22
PHF1O43189 RNU6-131P-201ENST00000391144 107 ntBASIC1.17□□□□□ -2.22
PHF1O43189 MIR1298-201ENST00000408783 112 ntBASIC1.17□□□□□ -2.22
PHF1O43189 HMGN2P32-201ENST00000444648 269 ntBASIC1.17□□□□□ -2.22
PHF1O43189 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.17□□□□□ -2.22
PHF1O43189 AC114811.1-201ENST00000507207 168 ntBASIC1.17□□□□□ -2.22
PHF1O43189 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
PHF1O43189 SNORD45.4-201ENST00000516629 73 ntBASIC1.17□□□□□ -2.22
PHF1O43189 Y_RNA.714-201ENST00000517065 90 ntBASIC1.17□□□□□ -2.22
PHF1O43189 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
PHF1O43189 AC130289.1-201ENST00000577321 73 ntBASIC1.17□□□□□ -2.22
PHF1O43189 uc_338.4-201ENST00000616635 176 ntBASIC1.17□□□□□ -2.22
PHF1O43189 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
PHF1O43189 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PHF1O43189 AC078938.1-201ENST00000620993 318 ntBASIC1.17□□□□□ -2.22
PHF1O43189 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.17□□□□□ -2.22
PHF1O43189 MIR411-201ENST00000362239 96 ntBASIC1.16□□□□□ -2.22
PHF1O43189 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms