Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-381P-201ENST00000391259 108 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 MIR1267-201ENST00000408723 78 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 MLLT10P1-201ENST00000418346 262 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 SNRPGP10-201ENST00000432323 225 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 AC108059.2-201ENST00000434626 151 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 AC245047.8-201ENST00000456455 284 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 HMGN1P7-201ENST00000491722 313 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 RNA5SP168-201ENST00000516642 112 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 AL358944.1-201ENST00000528537 144 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HDAC3O15379 MIR4778-201ENST00000577635 80 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 AC015688.6-201ENST00000577737 104 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 MIR4724-201ENST00000579485 89 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HDAC3O15379 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HDAC3O15379 MIR367-201ENST00000362299 68 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 Y_RNA.297-201ENST00000364950 91 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 RNU6-950P-201ENST00000384651 107 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 SNORA8.3-201ENST00000384679 139 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 RNU6-907P-201ENST00000390924 102 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 AL034345.1-201ENST00000407768 123 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 AC004965.1-201ENST00000413033 213 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 PIGPP3-201ENST00000425307 415 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.11□□□□□ -2.23
HDAC3O15379 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 AC093850.1-201ENST00000454121 251 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 COX6CP14-201ENST00000469580 174 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 RNU6-561P-201ENST00000516222 102 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 AL049861.1-201ENST00000603130 150 ntBASIC1.11□□□□□ -2.23
HDAC3O15379 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HDAC3O15379 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HDAC3O15379 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HDAC3O15379 U8.5-201ENST00000364528 136 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNU4-17P-201ENST00000365598 141 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 Y_RNA.515-201ENST00000384535 112 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 MIR562-201ENST00000384894 95 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 SNORD72-201ENST00000390994 80 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNU11-5P-201ENST00000391216 129 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNA5SP482-201ENST00000391269 118 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.1□□□□□ -2.23
HDAC3O15379 AC108729.3-201ENST00000513484 108 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNU6-794P-201ENST00000517261 64 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
HDAC3O15379 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.1□□□□□ -2.23
HDAC3O15379 MIR4498-201ENST00000577599 66 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
HDAC3O15379 MIR4762-201ENST00000585261 75 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNU2-4P-201ENST00000606190 192 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 AL513423.1-201ENST00000621695 132 ntBASIC1.1□□□□□ -2.23
HDAC3O15379 RNU6-1123P-201ENST00000362347 106 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 SNORD50B-201ENST00000364995 70 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 MTND5P15-201ENST00000434246 349 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 Y_RNA.644-201ENST00000459006 113 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 AC092991.1-201ENST00000477176 376 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 AC114811.1-201ENST00000507207 168 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 Y_RNA.674-201ENST00000516362 113 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 RNU6-1007P-201ENST00000516586 107 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 RNU7-28P-201ENST00000516759 62 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 SUMO2P16-201ENST00000519475 264 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 SNORA28-201ENST00000606769 126 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
HDAC3O15379 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HDAC3O15379 ICE2P2-201ENST00000483823 2787 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 Y_RNA.571-201ENST00000384753 98 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 MIR616-201ENST00000385293 97 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 Y_RNA.587-201ENST00000391210 103 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 AL606845.1-201ENST00000404881 255 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 RNU6-847P-201ENST00000411115 108 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 FTH1P12-201ENST00000432137 551 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.08□□□□□ -2.24
HDAC3O15379 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.08□□□□□ -2.24
HDAC3O15379 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.08□□□□□ -2.24
HDAC3O15379 RNU6-1219P-201ENST00000516143 112 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 AC019176.1-201ENST00000518519 225 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 AC120024.3-201ENST00000603167 156 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 JPX_2.1-201ENST00000614161 69 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 SNORD3E-202ENST00000627253 216 ntBASIC1.08□□□□□ -2.24
HDAC3O15379 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
HDAC3O15379 RNU6-1020P-201ENST00000363684 107 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 Y_RNA.238-201ENST00000364441 102 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 MT-TR-201ENST00000387439 65 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 RNU6-131P-201ENST00000391144 107 ntBASIC1.07□□□□□ -2.24
HDAC3O15379 Y_RNA.622-201ENST00000411091 108 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms