Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
SAA2-SAA4A0A096LPE2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-888P-201ENST00000363010 101 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-442P-201ENST00000383968 104 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL161935.2-201ENST00000414627 60 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC244636.1-201ENST00000421152 228 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA59A-201ENST00000459326 152 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU7-25P-201ENST00000516544 62 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR4299-201ENST00000577899 72 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR376A2-201ENST00000636782 80 ntBASIC1.52□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORD14E-201ENST00000364009 85 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR676-201ENST00000390702 67 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA26-201ENST00000391286 122 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR548O-201ENST00000408583 114 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL445685.2-201ENST00000422551 342 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 PGBD4P5-201ENST00000445958 426 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL392103.1-201ENST00000447000 198 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU7-12P-201ENST00000516030 62 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-426P-201ENST00000516464 97 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR3646-201ENST00000578301 84 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL365205.2-201ENST00000594586 68 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL513423.1-201ENST00000621695 132 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA16.1-201ENST00000364597 132 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORD24-201ENST00000383884 75 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR526A1-201ENST00000384897 85 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR660-201ENST00000385235 97 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC019129.1-201ENST00000403786 261 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-504P-201ENST00000516568 104 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-126P-201ENST00000516685 103 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC112693.2-201ENST00000556538 232 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR4778-201ENST00000577635 80 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR6844-201ENST00000637122 62 ntBASIC1.5□□□□□ -2.17
SAA2-SAA4A0A096LPE2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AP006437.1-201ENST00000641440 3685 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.568-201ENST00000384742 113 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORD77.3-201ENST00000391113 65 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA75.5-201ENST00000391291 81 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RPL30P13-201ENST00000418873 348 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AF228730.3-201ENST00000436691 102 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RPL23AP6-201ENST00000446637 472 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA25.12-201ENST00000516202 82 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC090142.3-201ENST00000519012 385 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR548X2-201ENST00000579776 100 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR3129-201ENST00000581095 76 ntBASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.49□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-457P-201ENST00000363999 107 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-704P-201ENST00000364162 103 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORD50.2-201ENST00000365465 70 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA70B-201ENST00000384210 135 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 Y_RNA.497-201ENST00000384447 98 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU4-61P-201ENST00000411243 107 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-938P-201ENST00000411285 103 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 HMGN2P32-201ENST00000444648 269 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU4-57P-201ENST00000515980 135 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU2-60P-201ENST00000517290 128 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC024614.2-201ENST00000577584 372 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR3910-1-201ENST00000580936 111 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR4713-201ENST00000582691 75 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.48□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORA20-201ENST00000384662 132 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR613-201ENST00000385248 95 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-460P-201ENST00000391158 108 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RNU6-257P-201ENST00000410238 98 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 RPL31P63-201ENST00000422565 375 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 MIR4419B-201ENST00000577260 68 ntBASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.47□□□□□ -2.17
SAA2-SAA4A0A096LPE2 SNORD3E-202ENST00000627253 216 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms