Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNU6-70P-201ENST00000516438 60 ntBASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 RNU6-1116P-201ENST00000517269 99 ntBASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 SNORA63.2-201ENST00000362603 126 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 RNA5SP229-201ENST00000410809 99 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-807P-201ENST00000516805 107 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 uc_338.1-201ENST00000612113 180 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 uc_338.32-201ENST00000615087 172 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 AL442644.1-201ENST00000454390 3105 ntBASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-296P-201ENST00000384608 107 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 FO393413.1-201ENST00000402892 195 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-447P-201ENST00000410293 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1118P-201ENST00000410382 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1076P-201ENST00000410397 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-355P-201ENST00000410427 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-791P-201ENST00000410467 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-705P-201ENST00000410601 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1100P-201ENST00000410691 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-860P-201ENST00000410860 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1217P-201ENST00000411276 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-785P-201ENST00000411324 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 STAG3L5P-204ENST00000443759 179 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 AL031183.1-201ENST00000457667 207 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 RNU7-35P-201ENST00000517174 62 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 MIR4738-201ENST00000579134 87 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 SNORA28-201ENST00000606769 126 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 U6.90-201ENST00000614007 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 U6.70-201ENST00000620287 104 ntBASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC61Q9Y6R9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 RNU1-23P-201ENST00000363361 144 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 RNA5SP322-201ENST00000363617 119 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 Y_RNA.500-201ENST00000384466 111 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 AC245047.7-201ENST00000440265 293 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 AC008885.1-201ENST00000514930 301 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 SCARNA11.3-201ENST00000517276 130 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 MIR4513-201ENST00000581077 86 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 MIR4298-201ENST00000584380 73 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 FAM106DP-201ENST00000586416 501 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 AC244205.2-202ENST00000635781 342 ntBASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1190P-201ENST00000410811 104 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 RNU7-73P-201ENST00000458743 63 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 SNORD4B-201ENST00000459083 72 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 UBL5P2-201ENST00000583788 219 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 AL020996.3-201ENST00000606617 222 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 AC012531.5-201ENST00000611375 151 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 MIR7157-201ENST00000635801 60 ntBASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC61Q9Y6R9 RNA5SP295-201ENST00000362655 121 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 SNORA2B-201ENST00000384583 137 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 MIR218-1-201ENST00000384999 110 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 SNORD30.1-201ENST00000391309 70 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-602P-201ENST00000411155 105 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 UBE2DNL-203ENST00000474922 222 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-687P-201ENST00000516443 89 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 MIR1297-201ENST00000637311 77 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 AL035425.3-201ENST00000564206 4996 ntBASIC4.42□□□□□ -1.7
CCDC61Q9Y6R9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-161P-201ENST00000363051 106 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 Y_RNA.98-201ENST00000363109 102 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-800P-201ENST00000384473 103 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-342P-201ENST00000384521 104 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 MIR95-201ENST00000385072 81 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 RPL23AP94-201ENST00000512518 302 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 FGF7P7-201ENST00000514120 227 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 SNORD67.1-201ENST00000516618 108 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 MIR622-201ENST00000638396 96 ntBASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC61Q9Y6R9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC61Q9Y6R9 RNU6-1321P-201ENST00000390905 107 ntBASIC4.4□□□□□ -1.71
CCDC61Q9Y6R9 MICF-203ENST00000432679 129 ntBASIC4.4□□□□□ -1.71
CCDC61Q9Y6R9 CST9LP2-201ENST00000437612 320 ntBASIC4.4□□□□□ -1.71
CCDC61Q9Y6R9 SNORA48.11-201ENST00000517015 89 ntBASIC4.4□□□□□ -1.71
CCDC61Q9Y6R9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC61Q9Y6R9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 MIRLET7C-201ENST00000362160 84 ntBASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 SNORD114-10-201ENST00000363409 72 ntBASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 SNORA24-201ENST00000384096 131 ntBASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 SNORA54-201ENST00000384281 123 ntBASIC4.39□□□□□ -1.71
CCDC61Q9Y6R9 Y_RNA.508-201ENST00000384502 114 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms