Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL603825.1-201ENST00000438481 80 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 AL160236.1-201ENST00000556317 195 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU2-4P-201ENST00000606190 192 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 Pinc.1-201ENST00000616452 154 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORD50B-201ENST00000364995 70 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR194-1-201ENST00000384892 85 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 U8.13-201ENST00000390842 128 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 HMGN2P23-201ENST00000456759 269 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 RNA5SP153-201ENST00000516498 76 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 AC098479.1-201ENST00000609225 154 ntBASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHGA3Q9Y5H0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.09
PCDHGA3Q9Y5H0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-275P-201ENST00000364910 107 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 AC114811.1-201ENST00000507207 168 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 SCARNA8-201ENST00000515924 131 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-453P-201ENST00000516819 85 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 AC103810.8-201ENST00000607347 118 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 AL353997.5-201ENST00000618886 171 ntBASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 SNORD33-201ENST00000362761 85 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-47P-201ENST00000383866 107 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 MIR452-201ENST00000385020 85 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 MT-TT-201ENST00000387460 66 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU4-43P-201ENST00000410628 137 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 AL121914.1-201ENST00000450188 156 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 snoU13.9-201ENST00000458927 103 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-295P-201ENST00000516901 104 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 AC109810.1-201ENST00000534066 224 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 AC108706.1-201ENST00000611053 297 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 U6.106-201ENST00000636360 105 ntBASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 SNORD38C-201ENST00000384381 69 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 AL161935.2-201ENST00000414627 60 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 AC005840.1-201ENST00000498412 377 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.662-201ENST00000516028 97 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-365P-201ENST00000517113 106 ntBASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PCDHGA3Q9Y5H0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 RNA5SP99-201ENST00000364020 114 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 MIR15B-201ENST00000385045 98 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU2-70P-201ENST00000410718 179 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 PIGPP3-201ENST00000425307 415 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 SNRPGP8-201ENST00000454064 226 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 SNORA77B-201ENST00000578179 125 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 AC006441.5-201ENST00000612680 209 ntBASIC1.99□□□□□ -2.09
PCDHGA3Q9Y5H0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-199P-201ENST00000362954 107 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.240-201ENST00000364469 95 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-439P-201ENST00000384188 106 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 AC107393.1-201ENST00000512403 346 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-504P-201ENST00000516568 104 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.98□□□□□ -2.09
PCDHGA3Q9Y5H0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 SNORD45.3-201ENST00000363836 72 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.270-201ENST00000364693 104 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 Y_RNA.357-201ENST00000365487 109 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 MIR513A1-201ENST00000385138 129 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-907P-201ENST00000390924 102 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 RN7SKP51-201ENST00000410781 304 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 AC008834.1-201ENST00000511612 175 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-322P-201ENST00000516010 103 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 RNU6-197P-201ENST00000516680 100 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 MIR4431-201ENST00000579990 94 ntBASIC1.97□□□□□ -2.09
PCDHGA3Q9Y5H0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 ICE2P2-201ENST00000483823 2787 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.622-201ENST00000411091 108 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 RNA5SP458-201ENST00000516188 119 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 FTX_2.1-201ENST00000618816 94 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms