Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
SMARCAL1Q9NZC9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 MIR616-201ENST00000385293 97 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP496-201ENST00000391240 109 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 RNU7-120P-201ENST00000459334 63 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 OR9P1P-201ENST00000496431 281 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
SMARCAL1Q9NZC9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-682P-201ENST00000363843 106 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP482-201ENST00000391269 118 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AC009310.1-201ENST00000414414 451 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AC074198.2-201ENST00000508153 258 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP458-201ENST00000516188 119 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP481-201ENST00000516814 122 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 MIR4709-201ENST00000577272 72 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 MIR4744-201ENST00000581563 82 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AC108706.1-201ENST00000611053 297 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 AC021506.2-201ENST00000612354 169 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 U6.106-201ENST00000636360 105 ntBASIC1.61□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP99-201ENST00000364020 114 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-578P-201ENST00000390980 103 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-131P-201ENST00000391144 107 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 CALM2P4-201ENST00000430810 426 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 RNU7-28P-201ENST00000516759 62 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 AC072026.1-201ENST00000605023 201 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 AL391903.3-201ENST00000612158 163 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 uc_338.4-201ENST00000616635 176 ntBASIC1.6□□□□□ -2.15
SMARCAL1Q9NZC9 MIRLET7C-201ENST00000362160 84 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-103P-201ENST00000363686 107 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 SNORD50B-201ENST00000364995 70 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 SNORD72-201ENST00000390994 80 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 U8.16-201ENST00000391279 133 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 AL034345.1-201ENST00000407768 123 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 FTH1P12-201ENST00000432137 551 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 SNRPGP8-201ENST00000454064 226 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 AC099513.1-201ENST00000490423 301 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNA5SP168-201ENST00000516642 112 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNU7-149P-201ENST00000516739 59 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 SNORA28-201ENST00000606769 126 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 FTX_2.1-201ENST00000618816 94 ntBASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
SMARCAL1Q9NZC9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-203P-201ENST00000384038 104 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-360P-201ENST00000390944 104 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AL121914.1-201ENST00000450188 156 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AC023449.1-201ENST00000454464 154 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AC109810.1-201ENST00000534066 224 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 MIR4762-201ENST00000585261 75 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 Pinc.1-201ENST00000616452 154 ntBASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.270-201ENST00000364693 104 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-424P-201ENST00000384367 105 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 AC114811.1-201ENST00000507207 168 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 AC098479.1-201ENST00000609225 154 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 SNORD45.3-201ENST00000363836 72 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 Y_RNA.240-201ENST00000364469 95 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 U8.5-201ENST00000364528 136 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-275P-201ENST00000364910 107 ntBASIC1.56□□□□□ -2.16
SMARCAL1Q9NZC9 RNU6-728P-201ENST00000365375 104 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms