Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU4-80P-201ENST00000363200 141 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNU6-801P-201ENST00000364087 105 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.263-201ENST00000364659 114 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNU6-442P-201ENST00000383968 104 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNY1P14-201ENST00000384426 108 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 SNORD72-201ENST00000390994 80 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 U8.20-201ENST00000459445 131 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 RNU6-830P-201ENST00000516353 107 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 AC008507.4-201ENST00000585464 127 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 AC087685.1-201ENST00000587507 141 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 Pinc.1-201ENST00000616452 154 ntBASIC0.59□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.383-201ENST00000383855 97 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU6-21P-201ENST00000384710 107 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 U8.17-201ENST00000391292 132 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AL603910.2-201ENST00000407268 136 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 SNORA36B-201ENST00000410438 131 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU6-437P-201ENST00000459408 95 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU6-976P-201ENST00000516086 111 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU7-181P-201ENST00000517234 74 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RPL23AP91-201ENST00000569211 455 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AC012433.1-201ENST00000588916 398 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AC006157.1-201ENST00000611750 366 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AC007742.2-201ENST00000618226 398 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 AL138825.1-201ENST00000618587 192 ntBASIC0.58□□□□□ -2.32
POLR1EQ9GZS1 RNU4-50P-201ENST00000364361 141 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 SNORD113.3-201ENST00000364630 78 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 SNORA72.4-201ENST00000384174 132 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.471-201ENST00000384312 102 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.579-201ENST00000390939 94 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 SNORA26.5-201ENST00000391215 123 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 AC040926.1-201ENST00000530195 238 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 AL078603.1-201ENST00000603824 313 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 AC007485.1-201ENST00000616755 206 ntBASIC0.57□□□□□ -2.32
POLR1EQ9GZS1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 RNU6-674P-201ENST00000363831 107 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 RNU6-1009P-201ENST00000390996 107 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 MTCO2P33-201ENST00000402100 465 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 AC236972.2-201ENST00000434979 310 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 SNORD11-201ENST00000459124 84 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 AC005357.1-201ENST00000588399 301 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 AL080274.1-201ENST00000605565 220 ntBASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.56□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.197-201ENST00000364004 102 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 SNORA2B-201ENST00000384583 137 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 MIR802-201ENST00000390235 94 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 RNA5SP247-201ENST00000411181 105 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 POLR2KP2-201ENST00000438155 177 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 RNU6-1046P-201ENST00000516538 107 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 MIR548AO-201ENST00000579992 96 ntBASIC0.55□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.418-201ENST00000384029 102 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 AC005534.2-201ENST00000431047 433 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 MTND5P20-201ENST00000448677 143 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 SEPT14P8-201ENST00000508026 178 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 RNU4-57P-201ENST00000515980 135 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 RNU6-191P-201ENST00000516295 94 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 RNA5SP220-201ENST00000516298 104 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 MIR2681-201ENST00000581814 105 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 MIR4795-201ENST00000584182 89 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 SNORD113-5-201ENST00000607261 78 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 AC006441.5-201ENST00000612680 209 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 AC015726.2-201ENST00000620112 122 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 MTND1P7-201ENST00000632801 297 ntBASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
POLR1EQ9GZS1 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 SNORA51.10-201ENST00000384418 136 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 RNU6-102P-201ENST00000384485 104 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 MIR2115-201ENST00000516657 100 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 Y_RNA.713-201ENST00000517013 96 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 AC011195.1-201ENST00000578177 177 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 MIR4791-201ENST00000607666 84 ntBASIC0.53□□□□□ -2.32
POLR1EQ9GZS1 RNU4-73P-201ENST00000363164 141 ntBASIC0.52□□□□□ -2.33
POLR1EQ9GZS1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 291.7 ms