Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.7□□□□□ -2.3
HDHD3Q9BSH5 RNU4-90P-201ENST00000362773 141 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.389-201ENST00000383924 113 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.569-201ENST00000384749 103 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 MIR222-201ENST00000384992 110 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 MIR520C-201ENST00000385005 87 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 RNU6-1248P-201ENST00000391096 64 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 RNU2-13P-201ENST00000515909 113 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 RNU6-988P-201ENST00000519081 107 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 RPL23AP91-201ENST00000569211 455 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 MIR4680-201ENST00000580906 66 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 AC022140.2-201ENST00000623500 188 ntBASIC0.69□□□□□ -2.3
HDHD3Q9BSH5 SNORA25.3-201ENST00000363205 127 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.153-201ENST00000363615 91 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU6-770P-201ENST00000363929 105 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 SNORD14E-201ENST00000364009 85 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU6-290P-201ENST00000365212 101 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.455-201ENST00000384230 98 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 MIR200A-201ENST00000384875 90 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RPL21P38-201ENST00000418090 167 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU4-57P-201ENST00000515980 135 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.714-201ENST00000517065 90 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 MIR3973-201ENST00000579824 107 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 MIR2681-201ENST00000581814 105 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 AL355297.3-201ENST00000604082 446 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 SEPT14P17-201ENST00000617978 177 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 AC007742.2-201ENST00000618226 398 ntBASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
HDHD3Q9BSH5 RNU6-899P-201ENST00000363947 107 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 SNORD114-24-201ENST00000365029 72 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 RNU6-144P-201ENST00000383951 107 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 RNU6-442P-201ENST00000383968 104 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 AC131281.1-201ENST00000522984 164 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 AC131055.1-201ENST00000584626 316 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 AC104984.5-201ENST00000586878 94 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 JPX_2.1-201ENST00000614161 69 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 Pinc.1-201ENST00000616452 154 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 AC013791.1-201ENST00000616619 62 ntBASIC0.67□□□□□ -2.3
HDHD3Q9BSH5 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 RNU6-1272P-201ENST00000362776 107 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 RNU6-797P-201ENST00000363101 109 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 RNU6-326P-201ENST00000365480 107 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 Y_RNA.527-201ENST00000384573 102 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 MTCO2P33-201ENST00000402100 465 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 MTCO2P12-201ENST00000427426 682 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 MIR4524B-201ENST00000581569 115 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 MIR4781-201ENST00000585250 76 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 AC008133.2-201ENST00000624540 351 ntBASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
HDHD3Q9BSH5 UBE2WP1-201ENST00000362030 340 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.64-201ENST00000362845 102 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 RNU6-482P-201ENST00000391068 107 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 U8.17-201ENST00000391292 132 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 AC091959.1-201ENST00000495857 238 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.701-201ENST00000516812 110 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 RNU2-31P-201ENST00000516954 155 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 MIR5692C2-201ENST00000577959 77 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 MIR4661-201ENST00000582720 75 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 AL008718.3-201ENST00000610217 321 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 MIR6516-201ENST00000630554 81 ntBASIC0.65□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.16-201ENST00000362421 102 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.19-201ENST00000362462 99 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.210-201ENST00000364161 110 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 SNORD38C-201ENST00000384381 69 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 RNU6-985P-201ENST00000410182 104 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 RNU6-383P-201ENST00000410864 94 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.64□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.84-201ENST00000363011 104 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1138P-201ENST00000365359 106 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 SNORA33.2-201ENST00000365413 134 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms