Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.145-201ENST00000363527 102 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 SNORA63C-201ENST00000364578 129 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 SNORA80D-201ENST00000384488 135 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.512-201ENST00000384518 102 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 SNORA67.5-201ENST00000391036 107 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.19□□□□□ -2.22
CMTM3Q96MX0 MIR5688-201ENST00000580619 83 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 uc_338.4-201ENST00000616635 176 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 U6.104-201ENST00000637979 90 ntBASIC1.19□□□□□ -2.22
CMTM3Q96MX0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
CMTM3Q96MX0 AL391987.6-201ENST00000305671 199 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RNU6-238P-201ENST00000363313 106 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 MIR526A2-201ENST00000390198 65 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RNU7-41P-201ENST00000515917 61 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.18□□□□□ -2.22
CMTM3Q96MX0 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 AC008737.2-201ENST00000599446 118 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 MIR8062-201ENST00000621515 85 ntBASIC1.18□□□□□ -2.22
CMTM3Q96MX0 MIR335-201ENST00000362173 94 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 RNU6-211P-201ENST00000384047 107 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.574-201ENST00000384766 95 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 MIR1302-6-201ENST00000408466 90 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 MIR548F4-201ENST00000408515 105 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 AC108210.2-201ENST00000503681 201 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 RN7SKP164-201ENST00000516138 266 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.17□□□□□ -2.22
CMTM3Q96MX0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.17□□□□□ -2.22
CMTM3Q96MX0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CMTM3Q96MX0 RNA5SP264-201ENST00000363115 107 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 RNU6-738P-201ENST00000384531 106 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 U8.17-201ENST00000391292 132 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 RPS26P48-201ENST00000491713 339 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.16□□□□□ -2.22
CMTM3Q96MX0 RNU7-149P-201ENST00000516739 59 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 AC104984.5-201ENST00000586878 94 ntBASIC1.16□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.176-201ENST00000363815 109 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 MTCO2P24-201ENST00000515611 426 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 AL117187.1-201ENST00000555482 181 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 AC006006.1-201ENST00000603082 144 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 AL049861.1-201ENST00000603130 150 ntBASIC1.15□□□□□ -2.23
CMTM3Q96MX0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CMTM3Q96MX0 RNA5SP48-201ENST00000363969 126 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 RNU6-740P-201ENST00000364734 105 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 SNORA8.3-201ENST00000384679 139 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 MT-TW-201ENST00000387382 68 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 SNORD28B-201ENST00000390993 75 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.14□□□□□ -2.23
CMTM3Q96MX0 SNORD13-201ENST00000459299 104 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 RNU7-21P-201ENST00000459430 62 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.14□□□□□ -2.23
CMTM3Q96MX0 U2.14-201ENST00000615943 113 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 AC015726.2-201ENST00000620112 122 ntBASIC1.14□□□□□ -2.23
CMTM3Q96MX0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.461-201ENST00000384263 103 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.483-201ENST00000384380 101 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 snoU13.23-201ENST00000458863 104 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 SNORD77.4-201ENST00000516158 81 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.13□□□□□ -2.23
CMTM3Q96MX0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.13□□□□□ -2.23
CMTM3Q96MX0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
CMTM3Q96MX0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 AC008133.2-201ENST00000624540 351 ntBASIC1.13□□□□□ -2.23
CMTM3Q96MX0 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 MIR103A2-201ENST00000362154 78 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 RNU4-10P-201ENST00000364383 140 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 RNU6-60P-201ENST00000364792 103 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms