Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU6-131P-201ENST00000391144 107 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 MIR1289-2-201ENST00000408360 111 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 MIR548I3-201ENST00000408378 149 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 MIR548I1-201ENST00000408810 149 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU5E-9P-201ENST00000411164 104 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 FTH1P12-201ENST00000432137 551 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNA5SP168-201ENST00000516642 112 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU7-149P-201ENST00000516739 59 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU7-28P-201ENST00000516759 62 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 MRPS18CP4-201ENST00000535821 231 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 MIR4762-201ENST00000585261 75 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 AC095038.3-201ENST00000634439 195 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 Y_RNA.75-201ENST00000362927 97 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 SNORD45.3-201ENST00000363836 72 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 Y_RNA.240-201ENST00000364469 95 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 RNU6-275P-201ENST00000364910 107 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 RNU6-203P-201ENST00000384038 104 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 AL034345.1-201ENST00000407768 123 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS50Q96JG6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS50Q96JG6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS50Q96JG6 AL121914.1-201ENST00000450188 156 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 SNORD77.4-201ENST00000516158 81 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS50Q96JG6 AC015712.3-201ENST00000559380 164 ntBASIC1.86□□□□□ -2.11
VPS50Q96JG6 U8.5-201ENST00000364528 136 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 RNU6-209P-201ENST00000384118 107 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 MIR15B-201ENST00000385045 98 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VPS50Q96JG6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS50Q96JG6 SEPT7P4-201ENST00000437076 306 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS50Q96JG6 AC114811.1-201ENST00000507207 168 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 Y_RNA.662-201ENST00000516028 97 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS50Q96JG6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS50Q96JG6 AC008507.4-201ENST00000585464 127 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 SNORA28-201ENST00000606769 126 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 Pinc.1-201ENST00000616452 154 ntBASIC1.85□□□□□ -2.11
VPS50Q96JG6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS50Q96JG6 RNU6-484P-201ENST00000384016 107 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 RNU6-424P-201ENST00000384367 105 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 RNU6-950P-201ENST00000384651 107 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 RNU6-360P-201ENST00000390944 104 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 AC093850.1-201ENST00000454121 251 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 SNORD45.4-201ENST00000516629 73 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
VPS50Q96JG6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS50Q96JG6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 RNY3P5-201ENST00000384127 102 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 AC023449.1-201ENST00000454464 154 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS50Q96JG6 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 MIR4778-201ENST00000577635 80 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 MIR4769-201ENST00000584126 77 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 AC120024.3-201ENST00000603167 156 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
VPS50Q96JG6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS50Q96JG6 RNU6-728P-201ENST00000365375 104 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 RNU6-163P-201ENST00000384396 106 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 MIR5089-201ENST00000580047 84 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 AC104465.1-201ENST00000611365 139 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
VPS50Q96JG6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS50Q96JG6 Y_RNA.23-201ENST00000362496 106 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 Y_RNA.180-201ENST00000363867 113 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNU6-312P-201ENST00000364629 107 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 PGBD4P5-201ENST00000445958 426 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNU7-12P-201ENST00000516030 62 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNU6-1299P-201ENST00000516316 100 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
VPS50Q96JG6 RNA5SP432-201ENST00000362480 116 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 Y_RNA.432-201ENST00000384087 111 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 AC006461.1-201ENST00000412637 326 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS50Q96JG6 MIR4431-201ENST00000579990 94 ntBASIC1.8□□□□□ -2.12
VPS50Q96JG6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS50Q96JG6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 RNU6-804P-201ENST00000384286 107 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms