Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Y_RNA.579-201ENST00000390939 94 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 AC005534.2-201ENST00000431047 433 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.68□□□□□ -2.3
VMP1Q96GC9 SNORA4-201ENST00000584302 138 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 AC006157.1-201ENST00000611750 366 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
VMP1Q96GC9 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 RNU6-1209P-201ENST00000363655 107 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 Y_RNA.197-201ENST00000364004 102 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 Y_RNA.796-201ENST00000364268 102 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 Y_RNA.799-201ENST00000364992 102 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VMP1Q96GC9 RNY3P14-201ENST00000384309 102 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 AC010655.3-201ENST00000478818 450 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 RNU6-475P-201ENST00000516073 104 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 Y_RNA.673-201ENST00000516306 88 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 AC040926.1-201ENST00000530195 238 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 MIR4795-201ENST00000584182 89 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.67□□□□□ -2.3
VMP1Q96GC9 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
VMP1Q96GC9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU4-73P-201ENST00000363164 141 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 Y_RNA.112-201ENST00000363250 102 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 Y_RNA.383-201ENST00000383855 97 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU6-442P-201ENST00000383968 104 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 MIR802-201ENST00000390235 94 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU1-119P-201ENST00000391122 165 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU6-130P-201ENST00000411112 103 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 POLR2KP2-201ENST00000438155 177 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 NDUFA4P2-201ENST00000489989 244 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 AL080274.1-201ENST00000605565 220 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 PART1_1.1-201ENST00000611761 217 ntBASIC0.66□□□□□ -2.3
VMP1Q96GC9 RNU6-654P-201ENST00000364373 107 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 Y_RNA.269-201ENST00000364685 89 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 Y_RNA.286-201ENST00000364813 102 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 Y_RNA.370-201ENST00000365589 108 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 SNORA2B-201ENST00000384583 137 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MT-TD-201ENST00000387419 68 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 SNORD28B-201ENST00000390993 75 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1302-11-201ENST00000408051 138 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1302-9-201ENST00000408365 138 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1302-10-201ENST00000408734 138 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1302-7-201ENST00000408841 72 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 SNRPGP14-201ENST00000435400 219 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 RNU7-141P-201ENST00000459304 62 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 SEPT14P8-201ENST00000508026 178 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR4300-201ENST00000581016 96 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR2681-201ENST00000581814 105 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1302-2-201ENST00000607096 138 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 SNORD113-5-201ENST00000607261 78 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 Y_RNA.804-201ENST00000615262 101 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 AC007485.1-201ENST00000616755 206 ntBASIC0.65□□□□□ -2.31
VMP1Q96GC9 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU4-80P-201ENST00000363200 141 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-674P-201ENST00000363831 107 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-1248P-201ENST00000391096 64 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 SNORA36B-201ENST00000410438 131 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU2-14P-201ENST00000411053 191 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-437P-201ENST00000459408 95 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-830P-201ENST00000516353 107 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 MIR2115-201ENST00000516657 100 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 AL133255.1-201ENST00000606374 441 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 RMST_2.1-201ENST00000617263 136 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 uc_338.22-201ENST00000622722 187 ntBASIC0.64□□□□□ -2.31
VMP1Q96GC9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
VMP1Q96GC9 RNU6-801P-201ENST00000364087 105 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 SNORA72.4-201ENST00000384174 132 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 SNORD105-201ENST00000386910 85 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 RNU6-613P-201ENST00000410412 108 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 AC008507.4-201ENST00000585464 127 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
VMP1Q96GC9 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 Y_RNA.222-201ENST00000364264 102 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 Y_RNA.395-201ENST00000383945 109 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 307.9 ms