Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC015922.2-201ENST00000435593 184 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 RNU6-322P-201ENST00000516010 103 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 RNU6-561P-201ENST00000516222 102 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 AC097639.2-201ENST00000603159 172 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 AC106754.2-201ENST00000623006 233 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
NPIPB3Q92617 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 Y_RNA.240-201ENST00000364469 95 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 Y_RNA.634-201ENST00000364811 113 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 Y_RNA.662-201ENST00000516028 97 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 RNU6-504P-201ENST00000516568 104 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 RNU6-861P-201ENST00000516745 106 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 AC090142.3-201ENST00000519012 385 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPB3Q92617 FTX_2.1-201ENST00000618816 94 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 MIR6873-201ENST00000622788 63 ntBASIC1.63□□□□□ -2.15
NPIPB3Q92617 RNU6-682P-201ENST00000363843 106 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 SNORD24-201ENST00000383884 75 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 Y_RNA.555-201ENST00000384673 110 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 RNA5SP338-201ENST00000410495 85 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 RNU2-40P-201ENST00000410833 196 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 AC090049.2-201ENST00000550377 109 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 MIR4431-201ENST00000579990 94 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 MIR3162-201ENST00000581818 82 ntBASIC1.62□□□□□ -2.15
NPIPB3Q92617 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
NPIPB3Q92617 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.62□□□□□ -2.15
NPIPB3Q92617 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPIPB3Q92617 AL442644.1-201ENST00000454390 3105 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 Y_RNA.91-201ENST00000363042 107 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 Y_RNA.270-201ENST00000364693 104 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 SNORD1A-201ENST00000364968 72 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 RNU6-643P-201ENST00000384018 107 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 RNU6-209P-201ENST00000384118 107 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 MIR516B2-201ENST00000385190 85 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 MIR653-201ENST00000385279 96 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 NDUFB4P4-201ENST00000404822 243 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 MIR548O-201ENST00000408583 114 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 RNU4-53P-201ENST00000410828 140 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 AC005840.1-201ENST00000498412 377 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 AC008413.1-201ENST00000511864 177 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 Y_RNA.666-201ENST00000516187 112 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 RNU6-830P-201ENST00000516353 107 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 RNA5SP364-201ENST00000516938 78 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 FAM106DP-201ENST00000586416 501 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 AC015726.2-201ENST00000620112 122 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.61□□□□□ -2.15
NPIPB3Q92617 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NPIPB3Q92617 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NPIPB3Q92617 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.6□□□□□ -2.15
NPIPB3Q92617 Y_RNA.150-201ENST00000363562 102 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 RNU6-1065P-201ENST00000384513 106 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 MIR548I3-201ENST00000408378 149 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 MIR548I1-201ENST00000408810 149 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 RNU6-917P-201ENST00000516294 104 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 uc_338.20-201ENST00000621563 178 ntBASIC1.6□□□□□ -2.15
NPIPB3Q92617 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NPIPB3Q92617 Y_RNA.66-201ENST00000362862 102 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 RNU6-888P-201ENST00000363010 101 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 Y_RNA.357-201ENST00000365487 109 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NPIPB3Q92617 SNX2P2-201ENST00000424553 323 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 AC107027.2-201ENST00000512197 115 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 RNU6-693P-201ENST00000516134 107 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 AL365434.2-201ENST00000607979 234 ntBASIC1.59□□□□□ -2.15
NPIPB3Q92617 SNORD61-201ENST00000384252 73 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 RNU6-886P-201ENST00000384319 105 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC006461.1-201ENST00000412637 326 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 SEPT7P4-201ENST00000437076 306 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.58□□□□□ -2.16
NPIPB3Q92617 SNORD116-25-201ENST00000516517 92 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 RNU7-25P-201ENST00000516544 62 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 IGKV3-31-201ENST00000523109 329 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 MIR378D2-201ENST00000580636 98 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 MIR3935-201ENST00000583472 104 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 Y_RNA.783-201ENST00000613546 102 ntBASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
NPIPB3Q92617 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NPIPB3Q92617 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NPIPB3Q92617 Y_RNA.547-201ENST00000384654 119 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NPIPB3Q92617 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 PCNPP3-201ENST00000393579 471 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 RNU6-922P-201ENST00000516753 99 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 RNU6-1270P-201ENST00000517128 108 ntBASIC1.57□□□□□ -2.16
NPIPB3Q92617 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms