Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNU6-1109P-201ENST00000391187 107 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.06□□□□□ -2.24
CCDC71Q8IV32 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 JPX_2.1-201ENST00000614161 69 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC71Q8IV32 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC71Q8IV32 SNORA25.1-201ENST00000362326 128 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.336-201ENST00000365307 109 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 RNU6-763P-201ENST00000390865 106 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 RNU6-1054P-201ENST00000411293 104 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.637-201ENST00000459424 114 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC71Q8IV32 SNORA27.4-201ENST00000516650 95 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 AC006504.6-201ENST00000590142 199 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.812-201ENST00000610788 101 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.784-201ENST00000613803 101 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.787-201ENST00000616522 101 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.780-201ENST00000617336 101 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.801-201ENST00000619005 101 ntBASIC1.05□□□□□ -2.24
CCDC71Q8IV32 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC71Q8IV32 SNORA63-201ENST00000363450 132 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 RNU6-514P-201ENST00000384208 107 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 RNU6-1160P-201ENST00000384546 104 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 RNU6-1011P-201ENST00000384668 107 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 MTCO2P33-201ENST00000402100 465 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 AC113618.1-201ENST00000416747 285 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC71Q8IV32 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 AC005357.1-201ENST00000588399 301 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 AC013791.1-201ENST00000616619 62 ntBASIC1.04□□□□□ -2.24
CCDC71Q8IV32 UBE2WP1-201ENST00000362030 340 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 RNU6-1272P-201ENST00000362776 107 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 MIR136-201ENST00000385207 82 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 RNU6-1203P-201ENST00000410703 110 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 NDUFA4P2-201ENST00000489989 244 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AC091959.1-201ENST00000495857 238 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 SERF1AP1-201ENST00000514575 187 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 RNU6-1007P-201ENST00000516586 107 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.720-201ENST00000517166 92 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AC090142.3-201ENST00000519012 385 ntBASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC71Q8IV32 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCDC71Q8IV32 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC71Q8IV32 AC134026.1-201ENST00000623249 2239 ntBASIC1.03□□□□□ -2.25
CCDC71Q8IV32 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.16-201ENST00000362421 102 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 RNU6-1205P-201ENST00000363625 106 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 SNORD14E-201ENST00000364009 85 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.217-201ENST00000364214 105 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 MIR15B-201ENST00000385045 98 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.641-201ENST00000459414 105 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC71Q8IV32 RNU6-1338P-201ENST00000516328 91 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 RPL23AP91-201ENST00000569211 455 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC71Q8IV32 AC022140.2-201ENST00000623500 188 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
CCDC71Q8IV32 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC71Q8IV32 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC71Q8IV32 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC71Q8IV32 RNU6-694P-201ENST00000364071 147 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 RNY1-201ENST00000364228 113 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.242-201ENST00000364473 110 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 MIR606-201ENST00000384851 96 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 MIR613-201ENST00000385248 95 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC71Q8IV32 RPL39P39-201ENST00000455840 151 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 SNORD11-201ENST00000459124 84 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 SNORA74.3-201ENST00000517108 154 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 MIR5692C2-201ENST00000577959 77 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 AC008507.4-201ENST00000585464 127 ntBASIC1.01□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.145-201ENST00000363527 102 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 SNORA63C-201ENST00000364578 129 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 RNU6-442P-201ENST00000383968 104 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 MIR516B2-201ENST00000385190 85 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 RNA5SP496-201ENST00000391240 109 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 MIR1278-201ENST00000408753 81 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 SNRPGP14-201ENST00000435400 219 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 AC245047.7-201ENST00000440265 293 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 MTND5P22-201ENST00000458380 195 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 RNU6-947P-201ENST00000516264 106 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 snoU18.1-201ENST00000629629 71 ntBASIC1□□□□□ -2.25
CCDC71Q8IV32 Y_RNA.376-201ENST00000365638 108 ntBASIC0.99□□□□□ -2.25
CCDC71Q8IV32 SNORA70.7-201ENST00000384159 133 ntBASIC0.99□□□□□ -2.25
CCDC71Q8IV32 RNU6-662P-201ENST00000384253 104 ntBASIC0.99□□□□□ -2.25
CCDC71Q8IV32 RNU6-713P-201ENST00000384761 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms