Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-32P-201ENST00000383948 107 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-13P-201ENST00000384248 107 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-163P-201ENST00000384396 106 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-106P-201ENST00000384405 107 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-12P-201ENST00000384604 107 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-41P-201ENST00000384741 107 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-554P-201ENST00000410466 106 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 AP003484.1-201ENST00000530974 250 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 AC084364.2-201ENST00000546924 395 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 MIR5094-201ENST00000578766 85 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 AC069114.2-201ENST00000604699 304 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 RNU6-349P-201ENST00000362402 107 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 MIR597-201ENST00000384968 97 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 HMGN2P32-201ENST00000444648 269 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 SNORA31.10-201ENST00000516482 106 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 RNY4P20-201ENST00000516678 93 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 SNORA18.7-201ENST00000516910 131 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 AC002984.1-201ENST00000591692 448 ntBASIC2.53□□□□□ -2
RNF111Q6ZNA4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
RNF111Q6ZNA4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RNF111Q6ZNA4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RNF111Q6ZNA4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 SNORA63.5-201ENST00000363548 123 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 RNU1-133P-201ENST00000364867 167 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 MIR29C-201ENST00000385231 88 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 AC021443.1-201ENST00000604478 211 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 AL035470.1-201ENST00000622571 220 ntBASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF111Q6ZNA4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 AL596211.1-201ENST00000569873 2277 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 SNORA5B-201ENST00000363786 132 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 RNY1P6-201ENST00000384193 109 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 U8.17-201ENST00000391292 132 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 HSPE1P9-201ENST00000440046 311 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 RN7SKP132-201ENST00000516001 208 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 SNORA28-201ENST00000606769 126 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.51□□□□□ -2.01
RNF111Q6ZNA4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 MIR342-201ENST00000362212 99 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 SNORD38C-201ENST00000384381 69 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 SNX2P2-201ENST00000424553 323 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 RPS29P24-201ENST00000486345 171 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 RNU6-537P-201ENST00000517277 103 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 SUMO2P16-201ENST00000519475 264 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 MIR4679-1-201ENST00000637619 75 ntBASIC2.5□□□□□ -2.01
RNF111Q6ZNA4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 MIRLET7C-201ENST00000362160 84 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 RNU6-414P-201ENST00000363705 104 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 AC087499.4-201ENST00000448505 178 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 RNU7-164P-201ENST00000459221 62 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 SNORA59A-201ENST00000459326 152 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 RNA5SP356-201ENST00000515972 94 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 HSPE1P19-201ENST00000603327 295 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 AC091932.4-201ENST00000623386 200 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
RNF111Q6ZNA4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 RNU4-16P-201ENST00000364737 141 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 MT-TI-201ENST00000387365 69 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.677-201ENST00000516401 85 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 AC006254.2-201ENST00000603259 279 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 AC106754.2-201ENST00000623006 233 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 AL589743.1-201ENST00000551932 2712 ntBASIC2.48□□□□□ -2.01
RNF111Q6ZNA4 Y_RNA.163-201ENST00000363702 113 ntBASIC2.47□□□□□ -2.01
RNF111Q6ZNA4 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
RNF111Q6ZNA4 SNORA4.2-201ENST00000365313 147 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms