Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 RNU6-915P-201ENST00000364943 103 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 SNRPGP10-201ENST00000432323 225 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC233266.1-201ENST00000454518 96 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AP001328.1-201ENST00000528550 176 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC008507.4-201ENST00000585464 127 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC242852.1-201ENST00000612151 96 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 MIR6715A-201ENST00000615929 79 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC244015.1-201ENST00000622301 99 ntBASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
ZNF549Q6P9A3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 SNORD114-1-201ENST00000362705 72 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 U8.1-201ENST00000362843 134 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 MIR539-201ENST00000365690 78 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 RNU6-80P-201ENST00000384195 107 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 SNORA8-201ENST00000384574 139 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 MIR548A2-201ENST00000384956 97 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 MIR522-201ENST00000385071 87 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 SNORA12.1-201ENST00000390873 148 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 SNORD23.1-201ENST00000408212 104 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 RNU2-70P-201ENST00000410718 179 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 RNA5SP270-201ENST00000411361 118 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 UBL5P3-201ENST00000475112 231 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 RNU6-659P-201ENST00000516454 104 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 RNU2-56P-201ENST00000516826 190 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 MIR4662B-201ENST00000579498 81 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 U7.2-201ENST00000607576 63 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 JPX_2.1-201ENST00000614161 69 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.84□□□□□ -2.11
ZNF549Q6P9A3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZNF549Q6P9A3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
ZNF549Q6P9A3 SNORA25.7-201ENST00000364375 127 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 SNORA1-201ENST00000384107 130 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 MIR515-2-201ENST00000384883 83 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 MIR515-1-201ENST00000384884 83 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 AL365205.2-201ENST00000594586 68 ntBASIC1.83□□□□□ -2.12
ZNF549Q6P9A3 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 RNU6-508P-201ENST00000363231 103 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 MTATP6P29-201ENST00000415057 132 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 FTH1P12-201ENST00000432137 551 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 AC023449.1-201ENST00000454464 154 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 RNU7-107P-201ENST00000459121 61 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 RNU4-57P-201ENST00000515980 135 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 AP002004.2-201ENST00000531656 154 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 AC131055.1-201ENST00000584626 316 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 MIR4762-201ENST00000585261 75 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 AC011603.4-201ENST00000611325 277 ntBASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
ZNF549Q6P9A3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 MIR126-201ENST00000362291 85 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 RNU6-888P-201ENST00000363010 101 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 U8.5-201ENST00000364528 136 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 SNORD61-201ENST00000384252 73 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 MIR504-201ENST00000385065 83 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 MIR624-201ENST00000385217 97 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 SNORA26-201ENST00000391286 122 ntBASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF549Q6P9A3 RNU6-126P-201ENST00000516685 103 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms