Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU6-1211P-201ENST00000459179 105 ntBASIC1.67□□□□□ -2.14
ERVFC1-1P60608 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.67□□□□□ -2.14
ERVFC1-1P60608 RNU6-1234P-201ENST00000516877 103 ntBASIC1.67□□□□□ -2.14
ERVFC1-1P60608 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
ERVFC1-1P60608 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ERVFC1-1P60608 Y_RNA.71-201ENST00000362892 104 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 Y_RNA.261-201ENST00000364631 102 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU6-915P-201ENST00000364943 103 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU6-1154P-201ENST00000391001 104 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 SNORA26-201ENST00000391286 122 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ERVFC1-1P60608 AC245047.3-201ENST00000429428 127 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU6-62P-201ENST00000516526 102 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU2-56P-201ENST00000516826 190 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU6-365P-201ENST00000517113 106 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 RNU2-60P-201ENST00000517290 128 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 AP001328.1-201ENST00000528550 176 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 AC084364.2-201ENST00000546924 395 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 MIR5007-201ENST00000583098 95 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 MIR4762-201ENST00000585261 75 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 AL096840.1-201ENST00000603287 93 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.66□□□□□ -2.14
ERVFC1-1P60608 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.66□□□□□ -2.14
ERVFC1-1P60608 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ERVFC1-1P60608 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
ERVFC1-1P60608 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNA5SP160-201ENST00000364866 120 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 SNORD50B-201ENST00000364995 70 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 SNORA1-201ENST00000384107 130 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 SNORD61-201ENST00000384252 73 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR548A2-201ENST00000384956 97 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR676-201ENST00000390702 67 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 Y_RNA.584-201ENST00000391090 114 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 HMGN2P39-201ENST00000398005 273 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 SNORA11.4-201ENST00000408823 129 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNU4-53P-201ENST00000410828 140 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 HMGN2P3-201ENST00000433603 273 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 HMGN2P5-201ENST00000436882 273 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 AC234781.5-201ENST00000508429 271 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 Y_RNA.666-201ENST00000516187 112 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNU6-313P-201ENST00000516317 112 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 Y_RNA.686-201ENST00000516548 134 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 RNU6-126P-201ENST00000516685 103 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 AC090142.3-201ENST00000519012 385 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR4529-201ENST00000578110 78 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR5002-201ENST00000584713 97 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 AL365205.2-201ENST00000594586 68 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR6715A-201ENST00000615929 79 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 TUG1_4.1-201ENST00000619464 181 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 AC009831.4-201ENST00000620744 325 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 MIR6132-201ENST00000622083 109 ntBASIC1.65□□□□□ -2.15
ERVFC1-1P60608 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.65□□□□□ -2.15
ERVFC1-1P60608 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
ERVFC1-1P60608 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ERVFC1-1P60608 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ERVFC1-1P60608 U8.1-201ENST00000362843 134 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 RNU6-1290P-201ENST00000362957 109 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 SNORD68-201ENST00000363214 84 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 Y_RNA.127-201ENST00000363386 109 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 U8.5-201ENST00000364528 136 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 Y_RNA.294-201ENST00000364916 102 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 MIR539-201ENST00000365690 78 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 SNORA48.3-201ENST00000391081 134 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AL356320.1-201ENST00000429616 163 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.64□□□□□ -2.15
ERVFC1-1P60608 RNVU1-2-201ENST00000516326 135 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 SNORA31.10-201ENST00000516482 106 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC131055.1-201ENST00000584626 316 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC087685.1-201ENST00000587507 141 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC103810.6-201ENST00000606708 136 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 AC011603.4-201ENST00000611325 277 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 MIR8054-201ENST00000620877 86 ntBASIC1.64□□□□□ -2.15
ERVFC1-1P60608 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ERVFC1-1P60608 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
ERVFC1-1P60608 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ERVFC1-1P60608 RNU6-888P-201ENST00000363010 101 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 RNU6-508P-201ENST00000363231 103 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 SNORD116-14-201ENST00000383894 92 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 SNORD116-17-201ENST00000383929 92 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 SNORD116-15-201ENST00000384445 92 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 SNORD116-19-201ENST00000384729 92 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 RNU6-440P-201ENST00000390882 105 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 MIR1261-201ENST00000408659 82 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 RNU6-735P-201ENST00000410612 107 ntBASIC1.63□□□□□ -2.15
ERVFC1-1P60608 SNRPGP14-201ENST00000435400 219 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms