Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNU6-442P-201ENST00000383968 104 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 RNU6-437P-201ENST00000459408 95 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 AC010655.3-201ENST00000478818 450 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 AC008507.4-201ENST00000585464 127 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 AC007485.1-201ENST00000616755 206 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 AC134026.1-201ENST00000623249 2239 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 AC068700.1-201ENST00000565862 3754 ntBASIC0.73□□□□□ -2.29
CTNNA1P35221 RNU4-80P-201ENST00000363200 141 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 RNY1P10-201ENST00000363268 113 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 Y_RNA.136-201ENST00000363444 102 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 AC022028.1-201ENST00000412054 408 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 MTND4P19-201ENST00000446659 478 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 AL392103.1-201ENST00000447000 198 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 RNU7-141P-201ENST00000459304 62 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.72□□□□□ -2.29
CTNNA1P35221 DEFB108E-201ENST00000524692 240 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 AC036111.3-201ENST00000526389 112 ntBASIC0.72□□□□□ -2.29
CTNNA1P35221 SNORA36B-201ENST00000410438 131 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.71□□□□□ -2.3
CTNNA1P35221 AC005534.2-201ENST00000431047 433 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 MTATP6P23-201ENST00000440153 476 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.71□□□□□ -2.3
CTNNA1P35221 SNORD11-201ENST00000459124 84 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 AC098869.1-201ENST00000481627 292 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 RNU6-1007P-201ENST00000516586 107 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.71□□□□□ -2.3
CTNNA1P35221 AP001094.1-201ENST00000579805 193 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 MIR4300-201ENST00000581016 96 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 AC005357.1-201ENST00000588399 301 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 AC104695.3-201ENST00000604052 296 ntBASIC0.71□□□□□ -2.3
CTNNA1P35221 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.71□□□□□ -2.3
CTNNA1P35221 RNU6-801P-201ENST00000364087 105 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 Y_RNA.286-201ENST00000364813 102 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 Y_RNA.418-201ENST00000384029 102 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 Y_RNA.424-201ENST00000384063 103 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 Y_RNA.445-201ENST00000384168 102 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 MIR802-201ENST00000390235 94 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 RNU6-191P-201ENST00000516295 94 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 AC090971.5-201ENST00000621102 293 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 AC090574.1-201ENST00000623186 233 ntBASIC0.7□□□□□ -2.3
CTNNA1P35221 Y_RNA.148-201ENST00000363557 117 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 Y_RNA.183-201ENST00000363882 113 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 RNU6-268P-201ENST00000364174 107 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 Y_RNA.509-201ENST00000384506 99 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 SNORD115-46-201ENST00000390982 71 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 MIR1302-7-201ENST00000408841 72 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 RNU2-14P-201ENST00000411053 191 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 Y_RNA.715-201ENST00000517082 110 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 AC136443.5-201ENST00000603741 370 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 AC006441.5-201ENST00000612680 209 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 Pinc.1-201ENST00000616452 154 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 MIR376A1-201ENST00000616574 68 ntBASIC0.69□□□□□ -2.3
CTNNA1P35221 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU6-899P-201ENST00000363947 107 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU6-654P-201ENST00000364373 107 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 SNORA2B-201ENST00000384583 137 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU6-1067P-201ENST00000384752 107 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 SNORA26.5-201ENST00000391215 123 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 HSPE1P25-201ENST00000455484 251 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU6-496P-201ENST00000516145 99 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 MIR548AR-201ENST00000582191 57 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 C8orf59P2-201ENST00000603441 271 ntBASIC0.68□□□□□ -2.3
CTNNA1P35221 RNU4-90P-201ENST00000362773 141 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 SNORD113-8-201ENST00000363497 74 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 RNU6-1048P-201ENST00000364054 107 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CTNNA1P35221 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 RNU6-823P-201ENST00000391042 103 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 Y_RNA.645-201ENST00000391229 102 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 AL603910.2-201ENST00000407268 136 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 PMCHL1-202ENST00000423102 261 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 MTND4LP30-201ENST00000454092 297 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.67□□□□□ -2.3
CTNNA1P35221 RNU6-1046P-201ENST00000516538 107 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 RPL23AP91-201ENST00000569211 455 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
CTNNA1P35221 MIR369-201ENST00000362155 70 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 RNU6-144P-201ENST00000383951 107 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 Y_RNA.537-201ENST00000384626 109 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 Y_RNA.581-201ENST00000391017 97 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 MIR1252-201ENST00000408861 65 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 AL117351.2-201ENST00000513571 157 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 MIR2115-201ENST00000516657 100 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 Y_RNA.721-201ENST00000517207 102 ntBASIC0.66□□□□□ -2.3
CTNNA1P35221 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.66□□□□□ -2.3
CTNNA1P35221 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.66□□□□□ -2.3
CTNNA1P35221 AC124312.5-201ENST00000604451 268 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms