Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AL078604.3-201ENST00000615580 211 ntBASIC1.52□□□□□ -2.17
HOXC9P31274 AC013791.1-201ENST00000616619 62 ntBASIC1.52□□□□□ -2.17
HOXC9P31274 MIRLET7C-201ENST00000362160 84 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 RNU6-196P-201ENST00000384315 107 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC9P31274 RPS29P1-201ENST00000465274 159 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.51□□□□□ -2.17
HOXC9P31274 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 MIR5692C2-201ENST00000577959 77 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 AC120024.3-201ENST00000603167 156 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
HOXC9P31274 UBE2WP1-201ENST00000362030 340 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 MIR335-201ENST00000362173 94 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 RNU6-1084P-201ENST00000362498 107 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 SNORD1A-201ENST00000364968 72 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 RNU6-131P-201ENST00000391144 107 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 RNU6-383P-201ENST00000410864 94 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 RNU6-651P-201ENST00000411040 105 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC9P31274 MIR3937-201ENST00000580135 106 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 MIR4295-201ENST00000585286 85 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 AC068700.1-201ENST00000565862 3754 ntBASIC1.5□□□□□ -2.17
HOXC9P31274 RNU6-1209P-201ENST00000363655 107 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 RNU4-10P-201ENST00000364383 140 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 RNU6-211P-201ENST00000384047 107 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 MIR522-201ENST00000385071 87 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 AL603910.2-201ENST00000407268 136 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 RPL30P13-201ENST00000418873 348 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 SNORD127-201ENST00000458892 86 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 CYCTP-201ENST00000504253 315 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 AC114811.1-201ENST00000507207 168 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 RPL23AP91-201ENST00000569211 455 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 AL078603.1-201ENST00000603824 313 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 AC022709.1-201ENST00000615967 87 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HOXC9P31274 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.49□□□□□ -2.17
HOXC9P31274 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 MIR367-201ENST00000362299 68 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 RNU6-199P-201ENST00000362954 107 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 U8.5-201ENST00000364528 136 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.277-201ENST00000364754 102 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.477-201ENST00000384352 108 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.556-201ENST00000384677 113 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.590-201ENST00000410140 107 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC9P31274 RNU6-1132P-201ENST00000459214 107 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 AC092991.1-201ENST00000477176 376 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.679-201ENST00000516416 91 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.714-201ENST00000517065 90 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 MIR4503-201ENST00000582187 83 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 U4.1-201ENST00000620349 87 ntBASIC1.48□□□□□ -2.17
HOXC9P31274 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HOXC9P31274 Y_RNA.14-201ENST00000362415 103 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 Y_RNA.144-201ENST00000363521 113 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 Y_RNA.518-201ENST00000384552 113 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 Y_RNA.540-201ENST00000384638 111 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXC9P31274 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 SNORD45.4-201ENST00000516629 73 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 MIR4762-201ENST00000585261 75 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 7SK.10-201ENST00000621414 298 ntBASIC1.47□□□□□ -2.17
HOXC9P31274 SNORD27-201ENST00000363981 72 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 RNU6-702P-201ENST00000364982 107 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 Y_RNA.352-201ENST00000365439 102 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 RPL39P38-201ENST00000467018 153 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 Y_RNA.668-201ENST00000516233 93 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXC9P31274 MIR2681-201ENST00000581814 105 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 MIR3149-201ENST00000584629 83 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 AC006006.1-201ENST00000603082 144 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
HOXC9P31274 RNU6-674P-201ENST00000363831 107 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 SNORD50B-201ENST00000364995 70 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 snoU2-30.1-201ENST00000365012 70 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 Y_RNA.354-201ENST00000365448 111 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 RNU6-144P-201ENST00000383951 107 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 MIR802-201ENST00000390235 94 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 MIR548H3-201ENST00000408771 118 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 NDUFA4P2-201ENST00000489989 244 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
HOXC9P31274 MIR4724-201ENST00000579485 89 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.45□□□□□ -2.18
HOXC9P31274 MIR373-201ENST00000362273 69 ntBASIC1.44□□□□□ -2.18
HOXC9P31274 RNU6-833P-201ENST00000363486 107 ntBASIC1.44□□□□□ -2.18
HOXC9P31274 RNU6-463P-201ENST00000384340 107 ntBASIC1.44□□□□□ -2.18
HOXC9P31274 RNU6-1065P-201ENST00000384513 106 ntBASIC1.44□□□□□ -2.18
HOXC9P31274 snosnR66.1-201ENST00000391095 99 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms