Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC236972.2-201ENST00000434979 310 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 USP9YP23-201ENST00000455085 407 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC010598.1-201ENST00000510378 103 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNA5SP169-201ENST00000517268 117 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.87□□□□□ -2.55
SPTA1P02549 AC022616.4-201ENST00000522985 181 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 MIR3684-201ENST00000579779 74 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AL133255.1-201ENST00000606374 441 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 TUSC7.1-201ENST00000610969 165 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC016911.1-201ENST00000613297 452 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AL158209.2-201ENST00000619266 216 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC099654.12-201ENST00000639868 649 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.88□□□□□ -2.55
SPTA1P02549 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 RNU6-540P-201ENST00000384622 101 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AC096949.1-201ENST00000412047 152 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 RNU7-138P-201ENST00000459479 64 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.88□□□□□ -2.55
SPTA1P02549 RNU6-830P-201ENST00000516353 107 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 RNU7-25P-201ENST00000516544 62 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AL133215.3-201ENST00000609801 448 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 SNORD114-7-201ENST00000362520 77 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.88□□□□□ -2.55
SPTA1P02549 AL445193.1-201ENST00000441183 141 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 USP9YP12-201ENST00000450481 570 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AP003072.1-201ENST00000531740 145 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AC008536.2-201ENST00000607284 349 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AL512506.1-201ENST00000613918 449 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 AC009248.2-201ENST00000619826 254 ntBASIC-0.88□□□□□ -2.55
SPTA1P02549 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.88□□□□□ -2.55
SPTA1P02549 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-324P-201ENST00000363957 106 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-784P-201ENST00000384330 106 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-769P-201ENST00000384407 104 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-933P-201ENST00000384424 107 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 MIR518F-201ENST00000384973 87 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 SNORA49-201ENST00000386157 136 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU2-29P-201ENST00000410423 189 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 SNORD123-201ENST00000459473 70 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-274P-201ENST00000459566 107 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 MTCO1P29-201ENST00000496868 288 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 AC011352.1-201ENST00000512300 793 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNA5SP272-201ENST00000516095 111 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 AL442663.2-201ENST00000554385 511 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 MTCO3P23-201ENST00000561363 289 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-86P-201ENST00000606534 107 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 SNORD114-29-201ENST00000364819 70 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 U8.15-201ENST00000390947 134 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 RNA5SP20-201ENST00000515976 84 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.89□□□□□ -2.55
SPTA1P02549 JPX_2.1-201ENST00000614161 69 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 AL391262.2-201ENST00000622466 494 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 U6.114-201ENST00000636407 96 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.89□□□□□ -2.55
SPTA1P02549 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 SNORD14E-201ENST00000364009 85 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-266P-201ENST00000364225 107 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-354P-201ENST00000383862 107 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-610P-201ENST00000384264 107 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-903P-201ENST00000391270 109 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MTATP6P18-201ENST00000417994 673 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RPL30P15-201ENST00000457129 321 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MTND1P24-201ENST00000552175 861 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MTND4LP25-201ENST00000570218 163 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MIR4423-201ENST00000580922 80 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MIR335-201ENST00000362173 94 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 SNORD50B-201ENST00000364995 70 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-926P-201ENST00000384075 107 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MIR588-201ENST00000384900 83 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
SPTA1P02549 ELOCP4-201ENST00000420090 333 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 MTCO2P27-201ENST00000420740 428 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-329P-201ENST00000459618 107 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 AC079140.5-201ENST00000507882 310 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-107P-201ENST00000516643 102 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNA5SP54-201ENST00000516951 92 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 AL353803.5-201ENST00000599815 141 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 AC005972.2-201ENST00000604690 348 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 AC009159.2-201ENST00000617603 606 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 AC103705.1-201ENST00000619013 241 ntBASIC-0.9□□□□□ -2.55
SPTA1P02549 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 RNA5SP245-201ENST00000364239 121 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 RNU6-449P-201ENST00000383914 107 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 RNU6-434P-201ENST00000384376 107 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 AL590002.1-201ENST00000406554 418 ntBASIC-0.91□□□□□ -2.56
SPTA1P02549 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms