Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
TOP3BO95985 AC011604.1-201ENST00000545978 196 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 AL160236.1-201ENST00000556317 195 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 MIR2681-201ENST00000581814 105 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 AL359881.1-201ENST00000602916 267 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 U7.2-201ENST00000607576 63 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 U6.73-201ENST00000619194 103 ntBASIC2.09□□□□□ -2.07
TOP3BO95985 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TOP3BO95985 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TOP3BO95985 RNY1P10-201ENST00000363268 113 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 RNU6-978P-201ENST00000364371 103 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 Y_RNA.273-201ENST00000364703 102 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 RNU6-1336P-201ENST00000383886 109 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 RNU6-1080P-201ENST00000383982 107 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 AC245047.4-201ENST00000433189 144 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 HMGN2P34-201ENST00000437647 269 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.08□□□□□ -2.08
TOP3BO95985 SNORD11-201ENST00000459124 84 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 SNORD77.4-201ENST00000516158 81 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 AC090142.3-201ENST00000519012 385 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
TOP3BO95985 uc_338.4-201ENST00000616635 176 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TOP3BO95985 AC245060.5-201ENST00000610778 3293 ntBASIC2.08□□□□□ -2.08
TOP3BO95985 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TOP3BO95985 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RNU6-1164P-201ENST00000364428 107 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RNU6-915P-201ENST00000364943 103 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 Y_RNA.353-201ENST00000365440 108 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 SNORD20-201ENST00000384550 80 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 AC011406.1-201ENST00000512440 370 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 TRMT112P2-201ENST00000512910 132 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RNU4-57P-201ENST00000515980 135 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 RNU6-1096P-201ENST00000517089 102 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
TOP3BO95985 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
TOP3BO95985 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TOP3BO95985 Y_RNA.91-201ENST00000363042 107 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-23P-201ENST00000363283 107 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-1209P-201ENST00000363655 107 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 SNORA25.7-201ENST00000364375 127 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-215P-201ENST00000365169 102 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 MIR562-201ENST00000384894 95 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.06□□□□□ -2.08
TOP3BO95985 AC023449.1-201ENST00000454464 154 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-1146P-201ENST00000516282 102 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU6-659P-201ENST00000516454 104 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNA5SP153-201ENST00000516498 76 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 Y_RNA.686-201ENST00000516548 134 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 RNU7-193P-201ENST00000516723 65 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 AC097639.2-201ENST00000603159 172 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 AC073413.2-201ENST00000604332 360 ntBASIC2.06□□□□□ -2.08
TOP3BO95985 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.06□□□□□ -2.08
TOP3BO95985 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TOP3BO95985 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 Y_RNA.634-201ENST00000364811 113 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 RNU6-1186P-201ENST00000410429 97 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 RNU2-70P-201ENST00000410718 179 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.05□□□□□ -2.08
TOP3BO95985 RNU7-128P-201ENST00000517247 62 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.05□□□□□ -2.08
TOP3BO95985 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 AL359821.1-201ENST00000605519 182 ntBASIC2.05□□□□□ -2.08
TOP3BO95985 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TOP3BO95985 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TOP3BO95985 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 AL353689.1-201ENST00000438895 199 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 ATP5J2P3-201ENST00000451550 258 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.04□□□□□ -2.08
TOP3BO95985 RNU7-107P-201ENST00000459121 61 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 RNU7-99P-201ENST00000516271 62 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.04□□□□□ -2.08
TOP3BO95985 AC007229.1-201ENST00000590455 412 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 AC078899.2-201ENST00000595282 212 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 Y_RNA.783-201ENST00000613546 102 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 JPX_2.1-201ENST00000614161 69 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
TOP3BO95985 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TOP3BO95985 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TOP3BO95985 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 U8.1-201ENST00000362843 134 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 RNU6-1138P-201ENST00000365359 106 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms