Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC245047.8-201ENST00000456455 284 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AC114811.1-201ENST00000507207 168 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 Y_RNA.714-201ENST00000517065 90 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AC008507.4-201ENST00000585464 127 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AL049861.1-201ENST00000603130 150 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 Z83818.1-201ENST00000603584 150 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AL391903.3-201ENST00000612158 163 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AC027279.3-201ENST00000625055 122 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 Y_RNA.7-201ENST00000362352 102 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 Y_RNA.435-201ENST00000384095 112 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 Y_RNA.644-201ENST00000459006 113 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 CYCTP-201ENST00000504253 315 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
ZIC3O60481 Y_RNA.674-201ENST00000516362 113 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 SNORD45.4-201ENST00000516629 73 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 Y_RNA.700-201ENST00000516806 100 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 AL353997.5-201ENST00000618886 171 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 SNORD3E-202ENST00000627253 216 ntBASIC1.55□□□□□ -2.16
ZIC3O60481 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ZIC3O60481 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ZIC3O60481 Y_RNA.121-201ENST00000363309 113 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU6-833P-201ENST00000363486 107 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU6-103P-201ENST00000363686 107 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 SNORD48-201ENST00000364953 64 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU6-1138P-201ENST00000365359 106 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNY3P5-201ENST00000384127 102 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 Y_RNA.571-201ENST00000384753 98 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU6-482P-201ENST00000391068 107 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 Y_RNA.587-201ENST00000391210 103 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 PIGPP3-201ENST00000425307 415 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU7-12P-201ENST00000516030 62 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 SNORD77.4-201ENST00000516158 81 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 RNU7-149P-201ENST00000516739 59 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC3O60481 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC3O60481 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC3O60481 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
ZIC3O60481 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
ZIC3O60481 RNU6-1084P-201ENST00000362498 107 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 RNU6-1020P-201ENST00000363684 107 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 snoU2-30.1-201ENST00000365012 70 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 Y_RNA.785-201ENST00000384290 109 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 RNU6-163P-201ENST00000384396 106 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 SNORD72-201ENST00000390994 80 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 RNU6-1228P-201ENST00000391014 107 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 AL606845.1-201ENST00000404881 255 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 AL138752.1-201ENST00000452964 351 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 AC023449.1-201ENST00000454464 154 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 AC005908.1-201ENST00000468701 347 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
ZIC3O60481 RNU6-1007P-201ENST00000516586 107 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 MIR4778-201ENST00000577635 80 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 RNU2-4P-201ENST00000606190 192 ntBASIC1.53□□□□□ -2.16
ZIC3O60481 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.17
ZIC3O60481 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 MIR891A-201ENST00000401237 79 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 SNRPGP14-201ENST00000435400 219 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 AC093850.1-201ENST00000454121 251 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 MIR4744-201ENST00000581563 82 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 AC012493.3-201ENST00000604494 112 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
ZIC3O60481 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 Y_RNA.29-201ENST00000362570 113 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 SNORD14E-201ENST00000364009 85 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 Y_RNA.336-201ENST00000365307 109 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 RNU2-55P-201ENST00000411146 174 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 Y_RNA.793-201ENST00000411222 111 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 SNRPGP8-201ENST00000454064 226 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 RNU6-561P-201ENST00000516222 102 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 SNORA81.3-201ENST00000517283 198 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC3O60481 Pinc.1-201ENST00000616452 154 ntBASIC1.51□□□□□ -2.17
ZIC3O60481 Y_RNA.140-201ENST00000363474 103 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 RNU6-578P-201ENST00000390980 103 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 HMGN2P32-201ENST00000444648 269 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 RNA5SP458-201ENST00000516188 119 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.5□□□□□ -2.17
ZIC3O60481 AC022559.1-201ENST00000520905 205 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 AC024614.2-201ENST00000577584 372 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 MIR4662B-201ENST00000579498 81 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 AC108706.1-201ENST00000611053 297 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.5□□□□□ -2.17
ZIC3O60481 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
ZIC3O60481 RNU6-268P-201ENST00000364174 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms