Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-509P-201ENST00000363519 107 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNA5SP403-201ENST00000363598 108 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU4-16P-201ENST00000364737 141 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-721P-201ENST00000410155 105 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 USP9YP30-201ENST00000430729 455 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 SNORD38.3-201ENST00000516599 73 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU7-53P-201ENST00000516705 60 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AP000942.4-201ENST00000604811 241 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AL512506.1-201ENST00000613918 449 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AP001282.2-201ENST00000616149 309 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 AC007671.2-201ENST00000637344 619 ntBASIC-1.55□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-900P-201ENST00000384498 102 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 SCARNA18B-201ENST00000458806 135 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 AC022878.1-201ENST00000530684 149 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR4306-201ENST00000583390 91 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-86P-201ENST00000606534 107 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 AL121757.2-201ENST00000611223 313 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.56□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-933P-201ENST00000384424 107 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 MT-TY-201ENST00000387409 66 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 SNORA25.16-201ENST00000516741 121 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-175P-201ENST00000516896 107 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 AL356055.1-201ENST00000602528 446 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 AC006566.1-201ENST00000608943 513 ntBASIC-1.57□□□□□ -2.66
CHKB-CPT1BH3BT56 MTND5P18-201ENST00000445624 1801 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-901P-201ENST00000384593 106 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR587-201ENST00000384845 96 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 MTND2P9-201ENST00000422293 931 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 SCARNA1-201ENST00000517138 166 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 AC093023.1-201ENST00000547375 507 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 AL133215.3-201ENST00000609801 448 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR3674-201ENST00000636576 68 ntBASIC-1.58□□□□□ -2.66
CHKB-CPT1BH3BT56 SNORD115-30-201ENST00000364117 82 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 SNORD114-15-201ENST00000364687 72 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 SNORD115-44-201ENST00000365391 82 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR181B2-201ENST00000385004 89 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MTCO2P21-201ENST00000419780 677 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR3179-1-201ENST00000578940 84 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR3179-2-201ENST00000579107 84 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR3179-3-201ENST00000579566 84 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 MIR3179-4-201ENST00000617599 84 ntBASIC-1.59□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNA5SP192-201ENST00000364404 120 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-702P-201ENST00000364982 107 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-903P-201ENST00000391270 109 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 AL603910.2-201ENST00000407268 136 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNA5SP237-201ENST00000410414 113 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-276P-201ENST00000516114 96 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 SNORA19.3-201ENST00000516165 130 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 AC140658.3-201ENST00000567603 271 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 MTATP6P25-201ENST00000574491 261 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 MIR3115-201ENST00000577915 68 ntBASIC-1.6□□□□□ -2.67
CHKB-CPT1BH3BT56 AL589826.1-201ENST00000340697 249 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-501P-201ENST00000364072 100 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 SNORD114-29-201ENST00000364819 70 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 AL603914.1-201ENST00000401964 204 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 MTCO2P16-201ENST00000436962 677 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 USP9YP12-201ENST00000450481 570 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 RPL30P15-201ENST00000457129 321 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 JPX_2.1-201ENST00000614161 69 ntBASIC-1.61□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 MIR539-201ENST00000365690 78 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 SNORA69-201ENST00000383895 132 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-767P-201ENST00000384132 107 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 MIR518B-201ENST00000385127 83 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 SNORD72-201ENST00000390994 80 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 RNA5SP475-201ENST00000410568 110 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU7-180P-201ENST00000459240 63 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 CCDC34P1-201ENST00000507441 517 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 AC092807.2-201ENST00000609367 243 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 HULC.1-201ENST00000612720 240 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 AL607023.1-201ENST00000620045 248 ntBASIC-1.62□□□□□ -2.67
CHKB-CPT1BH3BT56 SNORD115-2-201ENST00000362842 82 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU7-25P-201ENST00000516544 62 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 AC141846.1-201ENST00000568348 142 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms