Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AC012433.1-201ENST00000588916 398 ntBASIC1.35□□□□□ -2.19
SHISA7A6NL88 BX284668.6-201ENST00000606899 438 ntBASIC1.35□□□□□ -2.19
SHISA7A6NL88 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SHISA7A6NL88 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
SHISA7A6NL88 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6-1123P-201ENST00000362347 106 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 SNORD33-201ENST00000362761 85 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6-1205P-201ENST00000363625 106 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6-801P-201ENST00000364087 105 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 Y_RNA.350-201ENST00000365409 98 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6-1289P-201ENST00000384431 106 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6-763P-201ENST00000390865 106 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 STAG3L5P-204ENST00000443759 179 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 RNU7-141P-201ENST00000459304 62 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 AC127455.1-201ENST00000565496 145 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 MIR2681-201ENST00000581814 105 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 AC021506.2-201ENST00000612354 169 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
SHISA7A6NL88 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
SHISA7A6NL88 SNORA1B-201ENST00000362535 133 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 Y_RNA.217-201ENST00000364214 105 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 U8.7-201ENST00000364940 136 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 Y_RNA.416-201ENST00000384014 113 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 RNU6-574P-201ENST00000384265 107 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 SNORA36B-201ENST00000410438 131 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
SHISA7A6NL88 AC023449.1-201ENST00000454464 154 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 Y_RNA.641-201ENST00000459414 105 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 RNU6-1007P-201ENST00000516586 107 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 AP000942.4-201ENST00000604811 241 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 AC013791.1-201ENST00000616619 62 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 MIR6788-201ENST00000618842 66 ntBASIC1.33□□□□□ -2.2
SHISA7A6NL88 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
SHISA7A6NL88 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
SHISA7A6NL88 RNU6-740P-201ENST00000364734 105 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 Y_RNA.293-201ENST00000364908 93 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 Y_RNA.489-201ENST00000384410 101 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 SNORA26.5-201ENST00000391215 123 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 AL603910.2-201ENST00000407268 136 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 AL135790.2-201ENST00000437701 267 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 AC079140.2-201ENST00000506193 142 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 MIR5692C2-201ENST00000577959 77 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.32□□□□□ -2.2
SHISA7A6NL88 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SHISA7A6NL88 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 AC134026.1-201ENST00000623249 2239 ntBASIC1.32□□□□□ -2.2
SHISA7A6NL88 MIR367-201ENST00000362299 68 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 SNORD27-201ENST00000363981 72 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 RNU6-1048P-201ENST00000364054 107 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 SNORA20.1-201ENST00000364790 130 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 Y_RNA.374-201ENST00000365606 101 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 RNU6-1080P-201ENST00000383982 107 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 Y_RNA.562-201ENST00000384695 113 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 MIR548J-201ENST00000408833 112 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 AC027119.1-201ENST00000440877 241 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 PGBD4P5-201ENST00000445958 426 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.31□□□□□ -2.2
SHISA7A6NL88 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 AC073349.3-201ENST00000617616 186 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.31□□□□□ -2.2
SHISA7A6NL88 snoU18.1-201ENST00000629629 71 ntBASIC1.31□□□□□ -2.2
SHISA7A6NL88 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.82-201ENST00000363000 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.92-201ENST00000363043 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 SNORD68-201ENST00000363214 84 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.117-201ENST00000363294 101 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.203-201ENST00000364106 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.235-201ENST00000364412 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.242-201ENST00000364473 110 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.277-201ENST00000364754 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.306-201ENST00000365015 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.312-201ENST00000365089 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.322-201ENST00000365151 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 RNU6-211P-201ENST00000384047 107 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.477-201ENST00000384352 108 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 RNU2-14P-201ENST00000411053 191 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.650-201ENST00000459002 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.777-201ENST00000516982 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
SHISA7A6NL88 MIR4724-201ENST00000579485 89 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AC005357.1-201ENST00000588399 301 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.771-201ENST00000598668 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AC006006.1-201ENST00000603082 144 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 AL513423.1-201ENST00000621695 132 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 Y_RNA.789-201ENST00000622480 102 ntBASIC1.3□□□□□ -2.2
SHISA7A6NL88 RNU6-674P-201ENST00000363831 107 ntBASIC1.29□□□□□ -2.2
SHISA7A6NL88 Y_RNA.188-201ENST00000363952 111 ntBASIC1.29□□□□□ -2.2
SHISA7A6NL88 RNU4-41P-201ENST00000364426 143 ntBASIC1.29□□□□□ -2.2
SHISA7A6NL88 Y_RNA.307-201ENST00000365022 117 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms