Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.47□□□□□ -2.01
SHISA3A0PJX4 SUMO2P16-201ENST00000519475 264 ntBASIC2.47□□□□□ -2.01
SHISA3A0PJX4 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
SHISA3A0PJX4 SNORD115-40-201ENST00000606510 82 ntBASIC2.47□□□□□ -2.01
SHISA3A0PJX4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHISA3A0PJX4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.47□□□□□ -2.01
SHISA3A0PJX4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.47□□□□□ -2.01
SHISA3A0PJX4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHISA3A0PJX4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SHISA3A0PJX4 RNU6-1014P-201ENST00000383940 103 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.46□□□□□ -2.02
SHISA3A0PJX4 HSPE1P9-201ENST00000440046 311 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.46□□□□□ -2.02
SHISA3A0PJX4 RNU6-56P-201ENST00000516986 93 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 MIR3200-201ENST00000580767 85 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 MIR4305-201ENST00000583252 102 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 AC006023.1-201ENST00000603944 259 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 MIR7112-201ENST00000616126 65 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 AL035470.1-201ENST00000622571 220 ntBASIC2.46□□□□□ -2.02
SHISA3A0PJX4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.46□□□□□ -2.02
SHISA3A0PJX4 AL596211.1-201ENST00000569873 2277 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 RNU6-414P-201ENST00000363705 104 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 Y_RNA.328-201ENST00000365208 113 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 MIR520A-201ENST00000384862 85 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 MIR518A2-201ENST00000384966 87 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 SNORA48.1-201ENST00000390879 135 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 U8.16-201ENST00000391279 133 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 Z92545.1-201ENST00000411782 234 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 RNU6-998P-201ENST00000515894 101 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 RNU7-123P-201ENST00000515911 60 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 AC002984.1-201ENST00000591692 448 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 AC006254.2-201ENST00000603259 279 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 YPEL5P2-201ENST00000605553 359 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 MIR8057-201ENST00000620957 69 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
SHISA3A0PJX4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.45□□□□□ -2.02
SHISA3A0PJX4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 SNORA63.5-201ENST00000363548 123 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 SNORA9.2-201ENST00000365361 133 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RNU6-756P-201ENST00000383997 107 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 HMGN2P3-201ENST00000433603 273 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 HMGN2P5-201ENST00000436882 273 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RPL39P34-201ENST00000477141 156 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 AC008885.1-201ENST00000514930 301 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RNA5SP168-201ENST00000516642 112 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 RNU6-537P-201ENST00000517277 103 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 MIR5004-201ENST00000579078 107 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 MIR3163-201ENST00000581592 73 ntBASIC2.44□□□□□ -2.02
SHISA3A0PJX4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.44□□□□□ -2.02
SHISA3A0PJX4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SHISA3A0PJX4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SHISA3A0PJX4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.43□□□□□ -2.02
SHISA3A0PJX4 SNORA1.2-201ENST00000365189 134 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 SNORA51.5-201ENST00000384126 131 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 MIR452-201ENST00000385020 85 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.43□□□□□ -2.02
SHISA3A0PJX4 RNA5SP281-201ENST00000516504 135 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 RNU6-826P-201ENST00000516827 104 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 AC090821.2-201ENST00000523552 176 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
SHISA3A0PJX4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 HMGN2P39-201ENST00000398005 273 ntBASIC2.42□□□□□ -2.02
SHISA3A0PJX4 MIR1267-201ENST00000408723 78 ntBASIC2.42□□□□□ -2.02
SHISA3A0PJX4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 RNU7-12P-201ENST00000516030 62 ntBASIC2.42□□□□□ -2.02
SHISA3A0PJX4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 MIR4325-201ENST00000583049 90 ntBASIC2.42□□□□□ -2.02
SHISA3A0PJX4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.42□□□□□ -2.02
SHISA3A0PJX4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHISA3A0PJX4 MIR302B-201ENST00000362188 73 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 MIR548D2-201ENST00000384955 97 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 SNX2P2-201ENST00000424553 323 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 AC107297.1-201ENST00000459991 176 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 RNA5SP481-201ENST00000516814 122 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 SUB1P4-201ENST00000566062 339 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms