Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB11Q9Y5F2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-34-201ENST00000362441 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-12-201ENST00000362583 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-29-201ENST00000362834 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-9-201ENST00000362912 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-21-201ENST00000362963 81 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-14-201ENST00000363090 81 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-13-201ENST00000363358 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-41-201ENST00000363608 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-11-201ENST00000363616 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-5-201ENST00000363633 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-39-201ENST00000363694 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-4-201ENST00000363810 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-16-201ENST00000363887 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-6-201ENST00000363942 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORA25.6-201ENST00000364121 118 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-42-201ENST00000364273 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-15-201ENST00000364809 81 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-1-201ENST00000364961 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-26-201ENST00000365067 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-10-201ENST00000365073 81 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 Y_RNA.342-201ENST00000365352 113 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-43-201ENST00000365503 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-36-201ENST00000365629 82 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 Y_RNA.466-201ENST00000384294 113 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 SNORA31.4-201ENST00000516049 129 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 AC090821.2-201ENST00000523552 176 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 AC069114.2-201ENST00000604699 304 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 uc_338.1-201ENST00000612113 180 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 AC087741.2-201ENST00000619415 172 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PCDHB11Q9Y5F2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 RNU6-661P-201ENST00000362409 107 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 RNU6-1019P-201ENST00000364424 107 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 RNU6-424P-201ENST00000384367 105 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 AL022718.1-201ENST00000412004 84 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 AC107297.1-201ENST00000459991 176 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 RPS23P4-201ENST00000487908 423 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 SCARNA23-201ENST00000516060 130 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 RNA5SP341-201ENST00000516261 117 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 SNORA31.10-201ENST00000516482 106 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB11Q9Y5F2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC092435.3-201ENST00000565538 3654 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 RNU1-58P-201ENST00000362413 163 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 RNY3P2-201ENST00000362918 102 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC015922.2-201ENST00000435593 184 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 S100A11P2-201ENST00000467589 312 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC113410.1-201ENST00000505029 247 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC004812.1-201ENST00000540773 146 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC021613.1-201ENST00000623880 111 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCDHB11Q9Y5F2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-19-201ENST00000363098 82 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-3-201ENST00000363100 82 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-18-201ENST00000363293 82 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 SNORD115-17-201ENST00000364612 82 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 Y_RNA.494-201ENST00000384432 111 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 Y_RNA.507-201ENST00000384500 99 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 MIR29C-201ENST00000385231 88 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 AL512326.2-201ENST00000426359 151 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 RN7SKP12-201ENST00000516275 143 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 MIR3618-201ENST00000580330 88 ntBASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB11Q9Y5F2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 RNU6-1099P-201ENST00000363533 107 ntBASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 Y_RNA.531-201ENST00000384589 121 ntBASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 MIR627-201ENST00000384979 97 ntBASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 MIR450A2-201ENST00000385022 100 ntBASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDHB11Q9Y5F2 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms