Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RNU6-738P-201ENST00000384531 106 ntBASIC1.24□□□□□ -2.21
Q9N2K0 MIR1323-201ENST00000408090 73 ntBASIC1.24□□□□□ -2.21
Q9N2K0 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
Q9N2K0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.24□□□□□ -2.21
Q9N2K0 CYP3A52P-201ENST00000563326 91 ntBASIC1.24□□□□□ -2.21
Q9N2K0 MIR3683-201ENST00000580847 82 ntBASIC1.24□□□□□ -2.21
Q9N2K0 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
Q9N2K0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.24□□□□□ -2.21
Q9N2K0 AC134026.1-201ENST00000623249 2239 ntBASIC1.24□□□□□ -2.21
Q9N2K0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.23□□□□□ -2.21
Q9N2K0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.23□□□□□ -2.21
Q9N2K0 MIR136-201ENST00000385207 82 ntBASIC1.23□□□□□ -2.21
Q9N2K0 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
Q9N2K0 MIR1298-201ENST00000408783 112 ntBASIC1.23□□□□□ -2.21
Q9N2K0 AC023449.1-201ENST00000454464 154 ntBASIC1.23□□□□□ -2.21
Q9N2K0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.23□□□□□ -2.21
Q9N2K0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.23□□□□□ -2.21
Q9N2K0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.23□□□□□ -2.21
Q9N2K0 AL117187.1-201ENST00000555482 181 ntBASIC1.23□□□□□ -2.21
Q9N2K0 MIR5692C2-201ENST00000577959 77 ntBASIC1.23□□□□□ -2.21
Q9N2K0 MIR5688-201ENST00000580619 83 ntBASIC1.23□□□□□ -2.21
Q9N2K0 FAM106DP-201ENST00000586416 501 ntBASIC1.23□□□□□ -2.21
Q9N2K0 AC008737.2-201ENST00000599446 118 ntBASIC1.23□□□□□ -2.21
Q9N2K0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Q9N2K0 MIR335-201ENST00000362173 94 ntBASIC1.22□□□□□ -2.21
Q9N2K0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.22□□□□□ -2.21
Q9N2K0 Y_RNA.176-201ENST00000363815 109 ntBASIC1.22□□□□□ -2.21
Q9N2K0 SNORD50B-201ENST00000364995 70 ntBASIC1.22□□□□□ -2.21
Q9N2K0 RNU6-442P-201ENST00000383968 104 ntBASIC1.22□□□□□ -2.21
Q9N2K0 Y_RNA.574-201ENST00000384766 95 ntBASIC1.22□□□□□ -2.21
Q9N2K0 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
Q9N2K0 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
Q9N2K0 MIR802-201ENST00000390235 94 ntBASIC1.22□□□□□ -2.21
Q9N2K0 MIR548F4-201ENST00000408515 105 ntBASIC1.22□□□□□ -2.21
Q9N2K0 RNU6-570P-201ENST00000517051 105 ntBASIC1.22□□□□□ -2.21
Q9N2K0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.22□□□□□ -2.21
Q9N2K0 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
Q9N2K0 MIR8062-201ENST00000621515 85 ntBASIC1.22□□□□□ -2.21
Q9N2K0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Q9N2K0 AL391987.6-201ENST00000305671 199 ntBASIC1.21□□□□□ -2.22
Q9N2K0 Y_RNA.275-201ENST00000364726 110 ntBASIC1.21□□□□□ -2.22
Q9N2K0 RNA5SP496-201ENST00000391240 109 ntBASIC1.21□□□□□ -2.22
Q9N2K0 MIR1302-6-201ENST00000408466 90 ntBASIC1.21□□□□□ -2.22
Q9N2K0 BTF3P11-201ENST00000426582 477 ntBASIC1.21□□□□□ -2.22
Q9N2K0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.21□□□□□ -2.22
Q9N2K0 DEFB108E-201ENST00000524692 240 ntBASIC1.21□□□□□ -2.22
Q9N2K0 RPL23AP91-201ENST00000569211 455 ntBASIC1.21□□□□□ -2.22
Q9N2K0 SNORD53B-201ENST00000577887 78 ntBASIC1.21□□□□□ -2.22
Q9N2K0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.21□□□□□ -2.22
Q9N2K0 MIR367-201ENST00000362299 68 ntBASIC1.2□□□□□ -2.22
Q9N2K0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.2□□□□□ -2.22
Q9N2K0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.2□□□□□ -2.22
Q9N2K0 RNA5SP190-201ENST00000365222 118 ntBASIC1.2□□□□□ -2.22
Q9N2K0 Y_RNA.376-201ENST00000365638 108 ntBASIC1.2□□□□□ -2.22
Q9N2K0 RNU6-662P-201ENST00000384253 104 ntBASIC1.2□□□□□ -2.22
Q9N2K0 SNORA67.6-201ENST00000391093 99 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
Q9N2K0 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
Q9N2K0 SNORD11-201ENST00000459124 84 ntBASIC1.2□□□□□ -2.22
Q9N2K0 SNORD13-201ENST00000459299 104 ntBASIC1.2□□□□□ -2.22
Q9N2K0 MTATP8P1-201ENST00000467115 207 ntBASIC1.2□□□□□ -2.22
Q9N2K0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.2□□□□□ -2.22
Q9N2K0 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
Q9N2K0 SCARNA24.2-201ENST00000516968 130 ntBASIC1.2□□□□□ -2.22
Q9N2K0 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
Q9N2K0 AP001282.2-201ENST00000616149 309 ntBASIC1.2□□□□□ -2.22
Q9N2K0 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
Q9N2K0 Y_RNA.149-201ENST00000363558 117 ntBASIC1.19□□□□□ -2.22
Q9N2K0 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
Q9N2K0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.19□□□□□ -2.22
Q9N2K0 MIR526A2-201ENST00000390198 65 ntBASIC1.19□□□□□ -2.22
Q9N2K0 AC108667.1-201ENST00000428618 249 ntBASIC1.19□□□□□ -2.22
Q9N2K0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.19□□□□□ -2.22
Q9N2K0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.19□□□□□ -2.22
Q9N2K0 AC108729.3-201ENST00000513484 108 ntBASIC1.19□□□□□ -2.22
Q9N2K0 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
Q9N2K0 AC090142.3-201ENST00000519012 385 ntBASIC1.19□□□□□ -2.22
Q9N2K0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.19□□□□□ -2.22
Q9N2K0 AC008269.2-201ENST00000561915 1105 ntBASIC1.19□□□□□ -2.22
Q9N2K0 MIR4724-201ENST00000579485 89 ntBASIC1.19□□□□□ -2.22
Q9N2K0 RNU6-238P-201ENST00000363313 106 ntBASIC1.18□□□□□ -2.22
Q9N2K0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.18□□□□□ -2.22
Q9N2K0 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
Q9N2K0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.18□□□□□ -2.22
Q9N2K0 Y_RNA.459-201ENST00000384251 102 ntBASIC1.18□□□□□ -2.22
Q9N2K0 Y_RNA.461-201ENST00000384263 103 ntBASIC1.18□□□□□ -2.22
Q9N2K0 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
Q9N2K0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
Q9N2K0 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
Q9N2K0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.18□□□□□ -2.22
Q9N2K0 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
Q9N2K0 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
Q9N2K0 SNORA74.3-201ENST00000517108 154 ntBASIC1.18□□□□□ -2.22
Q9N2K0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.18□□□□□ -2.22
Q9N2K0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.18□□□□□ -2.22
Q9N2K0 U2.14-201ENST00000615943 113 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms