Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU7-41P-201ENST00000515917 61 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU6-436P-201ENST00000516171 114 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNA5SP67-201ENST00000516422 131 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 SNORD45.4-201ENST00000516629 73 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1016P-201ENST00000516689 94 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC144568.1-201ENST00000520139 137 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AL355375.2-201ENST00000574825 175 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC018638.8-201ENST00000588755 281 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC048344.4-201ENST00000619744 527 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU6-961P-201ENST00000363893 105 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNA5SP48-201ENST00000363969 126 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 SNORD115-30-201ENST00000364117 82 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 U8.5-201ENST00000364528 136 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU6-99P-201ENST00000364721 107 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 SNORD50B-201ENST00000364995 70 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 SNORD14.1-201ENST00000365609 90 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.559-201ENST00000384686 107 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 SNORA75.4-201ENST00000391278 119 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU6-994P-201ENST00000410507 111 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 MTND3P8-201ENST00000412909 339 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RNU7-116P-201ENST00000516940 62 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC023827.1-201ENST00000569247 97 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 RBM11P1-201ENST00000604951 799 ntBASIC0.27□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 RNU6-601P-201ENST00000384540 107 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 RPS3AP52-201ENST00000435639 297 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 MTND5P5-201ENST00000503764 376 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 AC093534.1-201ENST00000504977 132 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 SCARNA8-201ENST00000515924 131 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 RN7SKP164-201ENST00000516138 266 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 MIR5188-201ENST00000583467 113 ntBASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK3Q9BYB0 SNORD114-31-201ENST00000363219 75 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNY3-201ENST00000365484 102 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 SNORA72-201ENST00000384339 132 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1297P-201ENST00000384415 104 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNU6-831P-201ENST00000384548 107 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 AL031003.1-201ENST00000404229 172 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1304P-201ENST00000411374 106 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RPS29P8-201ENST00000445109 171 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 PRDX4P1-201ENST00000507189 574 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 SNORA25.10-201ENST00000515926 124 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 RNU6-264P-201ENST00000517134 104 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 MIR548AX-201ENST00000580117 73 ntBASIC0.25□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1059P-201ENST00000363752 98 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.253-201ENST00000364562 112 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-580P-201ENST00000365159 107 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.404-201ENST00000383978 102 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.456-201ENST00000384232 111 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.554-201ENST00000384672 102 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MIR548K-201ENST00000408406 116 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MIR1827-201ENST00000408549 66 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MIR1302-7-201ENST00000408841 72 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU2-61P-201ENST00000411069 191 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 POLR3GP1-201ENST00000594073 261 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 AC005014.2-201ENST00000607795 599 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MIR4251-201ENST00000635819 61 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 AC100810.6-201ENST00000638068 285 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-626P-201ENST00000363354 107 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 SNORA1.2-201ENST00000365189 134 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-192P-201ENST00000391253 100 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1148P-201ENST00000410992 104 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 SNORD123-201ENST00000459473 70 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-720P-201ENST00000516363 108 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 EIF1P4-201ENST00000572664 335 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 AC022441.3-201ENST00000605737 136 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 JPX_2.1-201ENST00000614161 69 ntBASIC0.24□□□□□ -2.37
SHANK3Q9BYB0 RNU6-874P-201ENST00000362390 105 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 RNU6-623P-201ENST00000363143 105 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 SNORD18A-201ENST00000363753 72 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 SNORD115-47-201ENST00000391226 86 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.621-201ENST00000411065 96 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 SNRPGP10-201ENST00000432323 225 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 MTND3P10-201ENST00000450967 341 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1012P-201ENST00000516606 109 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 AC093027.1-201ENST00000546698 429 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 MIR2681-201ENST00000581814 105 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 AC002553.4-201ENST00000616896 331 ntBASIC0.23□□□□□ -2.37
SHANK3Q9BYB0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SHANK3Q9BYB0 Y_RNA.230-201ENST00000364348 109 ntBASIC0.22□□□□□ -2.37
SHANK3Q9BYB0 RNU6-1323P-201ENST00000384025 107 ntBASIC0.22□□□□□ -2.37
SHANK3Q9BYB0 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.22□□□□□ -2.37
SHANK3Q9BYB0 AL353997.1-201ENST00000432936 108 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 392.1 ms