Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 MIR5692C2-201ENST00000577959 77 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 AC008507.4-201ENST00000585464 127 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CMTM3Q96MX0 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 RNU6-662P-201ENST00000384253 104 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 SNORD38C-201ENST00000384381 69 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 MIR504-201ENST00000385065 83 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 MIR802-201ENST00000390235 94 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 SNORD11-201ENST00000459124 84 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.720-201ENST00000517166 92 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.812-201ENST00000610788 101 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.784-201ENST00000613803 101 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.787-201ENST00000616522 101 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.780-201ENST00000617336 101 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.801-201ENST00000619005 101 ntBASIC1.25□□□□□ -2.21
CMTM3Q96MX0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
CMTM3Q96MX0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CMTM3Q96MX0 UBE2WP1-201ENST00000362030 340 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 RNU6-1011P-201ENST00000384668 107 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CMTM3Q96MX0 RNU6-910P-201ENST00000390844 107 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 BTF3P11-201ENST00000426582 477 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 RNU6-570P-201ENST00000517051 105 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 MIR8081-201ENST00000611533 95 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 MIR7843-201ENST00000622274 79 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 AC022140.2-201ENST00000623500 188 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
CMTM3Q96MX0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CMTM3Q96MX0 RNU6-713P-201ENST00000384761 107 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 MIR520C-201ENST00000385005 87 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 AL627390.1-201ENST00000396055 340 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 SNRPGP14-201ENST00000435400 219 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 AC023449.1-201ENST00000454464 154 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 SCARNA24.2-201ENST00000516968 130 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 MIR3192-201ENST00000584920 77 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 snoU18.1-201ENST00000629629 71 ntBASIC1.23□□□□□ -2.21
CMTM3Q96MX0 MIR606-201ENST00000384851 96 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 RNA5SP496-201ENST00000391240 109 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 MIR1289-2-201ENST00000408360 111 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 SNORD123-201ENST00000459473 70 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 TRBVB-201ENST00000477100 408 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.22□□□□□ -2.21
CMTM3Q96MX0 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 RNU7-43P-201ENST00000516554 64 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 RNU6-635P-201ENST00000516651 102 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 DEFB108E-201ENST00000524692 240 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 MIR4724-201ENST00000579485 89 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 AL391903.3-201ENST00000612158 163 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.22□□□□□ -2.21
CMTM3Q96MX0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 RNU6-694P-201ENST00000364071 147 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 RNA5SP190-201ENST00000365222 118 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.376-201ENST00000365638 108 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 SNORD72-201ENST00000390994 80 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 SNORA67.6-201ENST00000391093 99 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 RNU6-383P-201ENST00000410864 94 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.21□□□□□ -2.22
CMTM3Q96MX0 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.21□□□□□ -2.22
CMTM3Q96MX0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.21□□□□□ -2.22
CMTM3Q96MX0 MIR4764-201ENST00000580680 88 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 AC136443.5-201ENST00000603741 370 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 AL008718.3-201ENST00000610217 321 ntBASIC1.21□□□□□ -2.22
CMTM3Q96MX0 AC068700.1-201ENST00000565862 3754 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AL603910.2-201ENST00000407268 136 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AC245047.8-201ENST00000456455 284 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 snoU13.25-201ENST00000458945 104 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 MTATP8P1-201ENST00000467115 207 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.2□□□□□ -2.22
CMTM3Q96MX0 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 MIR3683-201ENST00000580847 82 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AL021707.8-201ENST00000609428 183 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AC006441.5-201ENST00000612680 209 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 AP001282.2-201ENST00000616149 309 ntBASIC1.2□□□□□ -2.22
CMTM3Q96MX0 Pinc.1-201ENST00000616452 154 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms