Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 Y_RNA.233-201ENST00000364407 101 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 MLLT10P1-201ENST00000418346 262 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 snoU13.23-201ENST00000458863 104 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 SNORD11-201ENST00000459124 84 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNU7-120P-201ENST00000459334 63 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 AC074198.2-201ENST00000508153 258 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNU6-561P-201ENST00000516222 102 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 RNU6-182P-201ENST00000516970 105 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 AL358944.1-201ENST00000528537 144 ntBASIC1.94□□□□□ -2.1
VPS50Q96JG6 MIR126-201ENST00000362291 85 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 SNORD68-201ENST00000363214 84 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 MIR616-201ENST00000385293 97 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 SNRPGP10-201ENST00000432323 225 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 AC069257.2-201ENST00000441819 155 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS50Q96JG6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 U6.106-201ENST00000636360 105 ntBASIC1.93□□□□□ -2.1
VPS50Q96JG6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS50Q96JG6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS50Q96JG6 Y_RNA.182-201ENST00000363880 111 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 Y_RNA.412-201ENST00000384001 104 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 RNU4-70P-201ENST00000384579 139 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 MIR583-201ENST00000384846 75 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS50Q96JG6 AL606845.1-201ENST00000404881 255 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS50Q96JG6 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 OR9P1P-201ENST00000496431 281 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 RNU6-237P-201ENST00000515985 71 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 RN7SKP164-201ENST00000516138 266 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS50Q96JG6 MIR5688-201ENST00000580619 83 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 JPX_2.1-201ENST00000614161 69 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 FTX_2.1-201ENST00000618816 94 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
VPS50Q96JG6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS50Q96JG6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
VPS50Q96JG6 Y_RNA.435-201ENST00000384095 112 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 MIR522-201ENST00000385071 87 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 MIR4744-201ENST00000581563 82 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 AC072026.1-201ENST00000605023 201 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
VPS50Q96JG6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
VPS50Q96JG6 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 RNU6-578P-201ENST00000390980 103 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 RNA5SP496-201ENST00000391240 109 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 PCNPP3-201ENST00000393579 471 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 Y_RNA.797-201ENST00000515977 94 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 MIR2681-201ENST00000581814 105 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 AC098479.1-201ENST00000609225 154 ntBASIC1.9□□□□□ -2.11
VPS50Q96JG6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VPS50Q96JG6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS50Q96JG6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VPS50Q96JG6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 SNORD72-201ENST00000390994 80 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 AC009310.1-201ENST00000414414 451 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 CALM2P4-201ENST00000430810 426 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 SNRPGP8-201ENST00000454064 226 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 AC099513.1-201ENST00000490423 301 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 AL391903.3-201ENST00000612158 163 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 AC021506.2-201ENST00000612354 169 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 uc_338.4-201ENST00000616635 176 ntBASIC1.89□□□□□ -2.11
VPS50Q96JG6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS50Q96JG6 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 MIRLET7C-201ENST00000362160 84 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 SNORD50B-201ENST00000364995 70 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 RNU6-482P-201ENST00000391068 107 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 RNA5SP482-201ENST00000391269 118 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 U8.16-201ENST00000391279 133 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS50Q96JG6 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 AC109810.1-201ENST00000534066 224 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
VPS50Q96JG6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS50Q96JG6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU6-103P-201ENST00000363686 107 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.87□□□□□ -2.11
VPS50Q96JG6 RNU6-886P-201ENST00000384319 105 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms