Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 U8.16-201ENST00000391279 133 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR1236-201ENST00000408340 102 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC022695.1-201ENST00000522089 237 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 MIR4429-201ENST00000580105 73 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 AC243994.1-201ENST00000618627 109 ntBASIC3.82□□□□□ -1.8
PTCD2Q8WV60 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD2Q8WV60 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA68.1-201ENST00000364537 132 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA24-201ENST00000384096 131 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR452-201ENST00000385020 85 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNU6-913P-201ENST00000390913 95 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNA5SP424-201ENST00000390988 115 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AL034345.1-201ENST00000407768 123 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA25.13-201ENST00000516395 103 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 RNU7-153P-201ENST00000516455 62 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR3944-201ENST00000581277 108 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AC008739.3-201ENST00000603262 127 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 SNORA62.6-201ENST00000606322 83 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 AC012676.2-201ENST00000619258 186 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 MIR6075-201ENST00000620782 95 ntBASIC3.81□□□□□ -1.8
PTCD2Q8WV60 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD2Q8WV60 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 Y_RNA.57-201ENST00000362806 113 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC125388.1-201ENST00000459631 156 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC104619.4-201ENST00000510773 249 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 SNORD59.2-201ENST00000516873 68 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 RNU7-35P-201ENST00000517174 62 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD2Q8WV60 AC007336.1-201ENST00000576365 3828 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AC091152.2-201ENST00000591628 2569 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-23P-201ENST00000363283 107 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-380P-201ENST00000410207 107 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNU6-1086P-201ENST00000410930 100 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 RNA5SP208-201ENST00000516156 78 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 SNORA70.19-201ENST00000516717 90 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
PTCD2Q8WV60 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PTCD2Q8WV60 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 Y_RNA.173-201ENST00000363776 113 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1067P-201ENST00000384752 107 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 SNORA26.7-201ENST00000391288 122 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 MIR1262-201ENST00000408276 93 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-447P-201ENST00000410293 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1118P-201ENST00000410382 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1076P-201ENST00000410397 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-355P-201ENST00000410427 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-791P-201ENST00000410467 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-705P-201ENST00000410601 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1100P-201ENST00000410691 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-860P-201ENST00000410860 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-1217P-201ENST00000411276 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNU6-785P-201ENST00000411324 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RN7SL330P-201ENST00000469709 307 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 SNORD67.1-201ENST00000516618 108 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 RNA5SP168-201ENST00000516642 112 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCD2Q8WV60 U6.90-201ENST00000614007 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 U6.70-201ENST00000620287 104 ntBASIC3.78□□□□□ -1.8
PTCD2Q8WV60 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNA5SP171-201ENST00000391071 115 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNU6ATAC-201ENST00000408749 126 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 snoU13.22-201ENST00000459428 104 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 SNORA31.10-201ENST00000516482 106 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 RNU6-539P-201ENST00000516665 103 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 AC105081.1-201ENST00000617727 106 ntBASIC3.77□□□□□ -1.81
PTCD2Q8WV60 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.98-201ENST00000363109 102 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 RNU6-478P-201ENST00000363904 110 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.354-201ENST00000365448 111 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 CD24P4-201ENST00000382840 243 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 HMGN1P33-201ENST00000432945 451 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 AL450471.1-201ENST00000447509 127 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms