Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL606845.1-201ENST00000404881 255 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.622-201ENST00000411091 108 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 SCARNA8-201ENST00000515924 131 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 RNU6-346P-201ENST00000516288 111 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 MIR5688-201ENST00000580619 83 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 AC108706.1-201ENST00000611053 297 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 MIR219B-201ENST00000637023 88 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.8-201ENST00000362353 102 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.121-201ENST00000363309 113 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 MIR616-201ENST00000385293 97 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 MIR764-201ENST00000390811 85 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 HMGN2P19-201ENST00000425149 265 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 CALM2P4-201ENST00000430810 426 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 OR9P1P-201ENST00000496431 281 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
SYNPOQ8N3V7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
SYNPOQ8N3V7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SYNPOQ8N3V7 MIR522-201ENST00000385071 87 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 MIR676-201ENST00000390702 67 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 RNU6-360P-201ENST00000390944 104 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 RNU7-12P-201ENST00000516030 62 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 RNA5SP168-201ENST00000516642 112 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 AC021506.2-201ENST00000612354 169 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 uc_338.4-201ENST00000616635 176 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYNPOQ8N3V7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 RNU6-103P-201ENST00000363686 107 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 Y_RNA.272-201ENST00000364696 102 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 SNORD113-1-201ENST00000365321 69 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 RNU6-1130P-201ENST00000365434 107 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 Y_RNA.580-201ENST00000391004 95 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 U8.16-201ENST00000391279 133 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 AL121914.1-201ENST00000450188 156 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 SNORD11-201ENST00000459124 84 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 MIR4744-201ENST00000581563 82 ntBASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SYNPOQ8N3V7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 RNU6-312P-201ENST00000364629 107 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 RN7SKP101-201ENST00000411376 320 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 FTH1P12-201ENST00000432137 551 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 AL603825.1-201ENST00000438481 80 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 TMSB4XP3-201ENST00000445144 114 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 MIR4713-201ENST00000582691 75 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 AC120024.3-201ENST00000603167 156 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 Pinc.1-201ENST00000616452 154 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 SNORD3E-202ENST00000627253 216 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 AC132825.6-201ENST00000638861 357 ntBASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SYNPOQ8N3V7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 SNORD14E-201ENST00000364009 85 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 RNU6-704P-201ENST00000364162 103 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 SNORD50.2-201ENST00000365465 70 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 MIR613-201ENST00000385248 95 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 SEPT7P4-201ENST00000437076 306 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 AC114811.1-201ENST00000507207 168 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 RNU7-149P-201ENST00000516739 59 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 MIR4778-201ENST00000577635 80 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 AL391903.3-201ENST00000612158 163 ntBASIC2.3□□□□□ -2.04
SYNPOQ8N3V7 RNU4-84P-201ENST00000364200 139 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 RNU6-275P-201ENST00000364910 107 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 SNORD116-18-201ENST00000383961 92 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 MIR1267-201ENST00000408723 78 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 PGBD4P5-201ENST00000445958 426 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 AC005840.1-201ENST00000498412 377 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 RNU6-548P-201ENST00000517083 115 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 AL353997.5-201ENST00000618886 171 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
SYNPOQ8N3V7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SYNPOQ8N3V7 SNORD50B-201ENST00000364995 70 ntBASIC2.28□□□□□ -2.04
SYNPOQ8N3V7 RNU6-728P-201ENST00000365375 104 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms