Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AP001328.1-201ENST00000528550 176 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 MIR378D2-201ENST00000580636 98 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AL359881.1-201ENST00000602916 267 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 U4atac.1-201ENST00000618345 95 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 AP001340.1-201ENST00000624405 217 ntBASIC2.46□□□□□ -2.02
SYNE4Q8N205 RNU6-235P-201ENST00000362644 107 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNU6-1325P-201ENST00000364905 105 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNU6-438P-201ENST00000365561 103 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNY3P5-201ENST00000384127 102 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNU6-429P-201ENST00000384582 108 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNU4-57P-201ENST00000515980 135 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 RNU7-116P-201ENST00000516940 62 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.45□□□□□ -2.02
SYNE4Q8N205 RPL23AP91-201ENST00000569211 455 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 MIR4438-201ENST00000585271 93 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
SYNE4Q8N205 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
SYNE4Q8N205 U8.1-201ENST00000362843 134 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 RNU6-1240P-201ENST00000365155 104 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 MIR539-201ENST00000365690 78 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE4Q8N205 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE4Q8N205 SNORD11-201ENST00000459124 84 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 AC093259.1-201ENST00000509755 300 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 RNU6-197P-201ENST00000516680 100 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 RNU2-60P-201ENST00000517290 128 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE4Q8N205 AL359821.1-201ENST00000605519 182 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 TUG1_4.1-201ENST00000619464 181 ntBASIC2.44□□□□□ -2.02
SYNE4Q8N205 RNU4-13P-201ENST00000364019 141 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 Y_RNA.332-201ENST00000365271 113 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 RNU6-597P-201ENST00000365620 102 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 SNORA72-201ENST00000384339 132 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 AL158823.1-201ENST00000418441 478 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 AC060773.1-201ENST00000421698 310 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.43□□□□□ -2.02
SYNE4Q8N205 RPS29P11-201ENST00000496507 171 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 SNORA4.4-201ENST00000515921 135 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 RNU7-172P-201ENST00000517125 64 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 RNU7-128P-201ENST00000517247 62 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 MIR5194-201ENST00000582634 120 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 U7.2-201ENST00000607576 63 ntBASIC2.43□□□□□ -2.02
SYNE4Q8N205 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNE4Q8N205 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
SYNE4Q8N205 SNORA63.4-201ENST00000362763 126 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 RNY1P10-201ENST00000363268 113 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 SNORA33-201ENST00000363664 130 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 Y_RNA.203-201ENST00000364106 102 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 Y_RNA.432-201ENST00000384087 111 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 RNA5SP496-201ENST00000391240 109 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 AC008134.1-201ENST00000420943 193 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 SNORD13-201ENST00000459299 104 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 snoU13.18-201ENST00000459483 104 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 SNORD77.4-201ENST00000516158 81 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 NDUFA5P6-201ENST00000542110 379 ntBASIC2.42□□□□□ -2.02
SYNE4Q8N205 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SYNE4Q8N205 RNU6-153P-201ENST00000364422 104 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 RNA5SP190-201ENST00000365222 118 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 RNU6-919P-201ENST00000516731 104 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 RNU6-856P-201ENST00000516959 98 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 AC011604.1-201ENST00000545978 196 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 MIR8081-201ENST00000611533 95 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 MIR6129-201ENST00000616087 109 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 AC006435.5-201ENST00000624486 112 ntBASIC2.41□□□□□ -2.02
SYNE4Q8N205 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNE4Q8N205 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
SYNE4Q8N205 RNU6-661P-201ENST00000362409 107 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 Y_RNA.280-201ENST00000364765 112 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 Y_RNA.634-201ENST00000364811 113 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 RNU6-1080P-201ENST00000383982 107 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 MIR562-201ENST00000384894 95 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 MIR7-2-201ENST00000384970 110 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 MIR9-3-201ENST00000385084 90 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 SNORA40.5-201ENST00000391061 128 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 Y_RNA.584-201ENST00000391090 114 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 MIR1262-201ENST00000408276 93 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 RNU4-62P-201ENST00000410125 130 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 Y_RNA.630-201ENST00000411370 108 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 MLLT10P1-201ENST00000418346 262 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 AC123900.1-201ENST00000420390 96 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 HMGN2P34-201ENST00000437647 269 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 NDUFA4P2-201ENST00000489989 244 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 AC022202.1-201ENST00000613515 211 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 uc_338.4-201ENST00000616635 176 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 U6.73-201ENST00000619194 103 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SYNE4Q8N205 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SYNE4Q8N205 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
SYNE4Q8N205 SNORA25.7-201ENST00000364375 127 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 RNU1-148P-201ENST00000384472 162 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms