Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
NKX6-1P78426 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
NKX6-1P78426 snoU2-30.1-201ENST00000365012 70 ntBASIC2□□□□□ -2.09
NKX6-1P78426 RNU6-47P-201ENST00000383866 107 ntBASIC2□□□□□ -2.09
NKX6-1P78426 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
NKX6-1P78426 CYCTP-201ENST00000504253 315 ntBASIC2□□□□□ -2.09
NKX6-1P78426 RNU6-126P-201ENST00000516685 103 ntBASIC2□□□□□ -2.09
NKX6-1P78426 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
NKX6-1P78426 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
NKX6-1P78426 AL513423.1-201ENST00000621695 132 ntBASIC2□□□□□ -2.09
NKX6-1P78426 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2□□□□□ -2.09
NKX6-1P78426 Y_RNA.182-201ENST00000363880 111 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 Y_RNA.233-201ENST00000364407 101 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 RNU6-728P-201ENST00000365375 104 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 MT-TT-201ENST00000387460 66 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NKX6-1P78426 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 PGBD4P5-201ENST00000445958 426 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 RNU7-120P-201ENST00000459334 63 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 RNA5SP168-201ENST00000516642 112 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 RNU6-453P-201ENST00000516819 85 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 MIR4662B-201ENST00000579498 81 ntBASIC1.99□□□□□ -2.09
NKX6-1P78426 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NKX6-1P78426 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NKX6-1P78426 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NKX6-1P78426 ZNF720P1-201ENST00000562403 1939 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 SNORD14E-201ENST00000364009 85 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 RNU6-424P-201ENST00000384367 105 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NKX6-1P78426 RNU2-55P-201ENST00000411146 174 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 CALM2P4-201ENST00000430810 426 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 HMGN2P32-201ENST00000444648 269 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 MRPS17P9-201ENST00000511924 393 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 SCARNA8-201ENST00000515924 131 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 RNU7-12P-201ENST00000516030 62 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 SNORD45.4-201ENST00000516629 73 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 AC120024.3-201ENST00000603167 156 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 AC027279.3-201ENST00000625055 122 ntBASIC1.98□□□□□ -2.09
NKX6-1P78426 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.98□□□□□ -2.09
NKX6-1P78426 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
NKX6-1P78426 RNU6-1123P-201ENST00000362347 106 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNU6-907P-201ENST00000390924 102 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNU6-578P-201ENST00000390980 103 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 SNORA26-201ENST00000391286 122 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 SNORA79-201ENST00000408376 140 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 MIR1267-201ENST00000408723 78 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNU2-64P-201ENST00000411315 191 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 PIGPP3-201ENST00000425307 415 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 NDUFA4P2-201ENST00000489989 244 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.97□□□□□ -2.09
NKX6-1P78426 AC107393.1-201ENST00000512403 346 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 RNU7-149P-201ENST00000516739 59 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX6-1P78426 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX6-1P78426 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.97□□□□□ -2.09
NKX6-1P78426 MIR8074-201ENST00000615081 81 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 Pinc.1-201ENST00000616452 154 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
NKX6-1P78426 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
NKX6-1P78426 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NKX6-1P78426 MIR424-201ENST00000362227 98 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 Y_RNA.75-201ENST00000362927 97 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 SNORD50B-201ENST00000364995 70 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 Y_RNA.336-201ENST00000365307 109 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 Y_RNA.338-201ENST00000365320 114 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 RNU6-1138P-201ENST00000365359 106 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 RNU6-442P-201ENST00000383968 104 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NKX6-1P78426 MIR891A-201ENST00000401237 79 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 AL121914.1-201ENST00000450188 156 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 SNORD77.4-201ENST00000516158 81 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 RNU6-1299P-201ENST00000516316 100 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 AC008507.4-201ENST00000585464 127 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 AC098479.1-201ENST00000609225 154 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 MIR6766-201ENST00000622641 72 ntBASIC1.96□□□□□ -2.1
NKX6-1P78426 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX6-1P78426 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-1P78426 RNU6-833P-201ENST00000363486 107 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 Y_RNA.622-201ENST00000411091 108 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 AC114811.1-201ENST00000507207 168 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 AC022559.1-201ENST00000520905 205 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 AC109810.1-201ENST00000534066 224 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 AC108706.1-201ENST00000611053 297 ntBASIC1.95□□□□□ -2.1
NKX6-1P78426 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.94□□□□□ -2.1
NKX6-1P78426 MIRLET7C-201ENST00000362160 84 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 Y_RNA.140-201ENST00000363474 103 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 RNU6-312P-201ENST00000364629 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms