Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR563-201ENST00000385080 79 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 AC005730.3-201ENST00000583067 366 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 AC121247.2-201ENST00000604776 136 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 AC004467.1-201ENST00000615678 330 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNU6-767P-201ENST00000384132 107 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNU6-318P-201ENST00000384283 103 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNU6-306P-201ENST00000384617 107 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNA5SP300-201ENST00000391197 107 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNU6-192P-201ENST00000391253 100 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 SNORA75.4-201ENST00000391278 119 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 CHEK2P4-201ENST00000450340 246 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.82□□□□□ -2.54
TPM4P67936 MIR4752-201ENST00000579672 72 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 AC006441.5-201ENST00000612680 209 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 JPX_2.1-201ENST00000614161 69 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 MIR2909-201ENST00000617113 69 ntBASIC-0.82□□□□□ -2.54
TPM4P67936 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MIR613-201ENST00000385248 95 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 RNU4-55P-201ENST00000410731 137 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MTCO1P5-201ENST00000433573 344 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.83□□□□□ -2.54
TPM4P67936 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.83□□□□□ -2.54
TPM4P67936 SNORD126-201ENST00000459475 77 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 AC107297.1-201ENST00000459991 176 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 RNU6-256P-201ENST00000516747 97 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MIR5701-3-201ENST00000578890 82 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MIR5701-1-201ENST00000585138 82 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 AC008507.4-201ENST00000585464 127 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 AC073648.5-201ENST00000603502 305 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MIR5701-2-201ENST00000615634 82 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 Z97988.1-201ENST00000637697 135 ntBASIC-0.83□□□□□ -2.54
TPM4P67936 MIR30D-201ENST00000362283 70 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 SNORD14C-201ENST00000365382 88 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 RNA5SP127-201ENST00000411051 133 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 MTND3P3-201ENST00000505004 126 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 RNU6-180P-201ENST00000516697 61 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 LRRC34P1-201ENST00000542742 915 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 MIR3666-201ENST00000607845 111 ntBASIC-0.84□□□□□ -2.54
TPM4P67936 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 SNORD28-201ENST00000384706 75 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 RNU4-30P-201ENST00000410245 143 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 RNU7-87P-201ENST00000459343 62 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 SNORA31.14-201ENST00000516728 116 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 AC027449.1-201ENST00000608890 407 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 MIR8055-201ENST00000610739 97 ntBASIC-0.85□□□□□ -2.55
TPM4P67936 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 RNU6-740P-201ENST00000364734 105 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 MIR196A2-201ENST00000385189 110 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 RNU4-83P-201ENST00000410863 133 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 MTND3P21-201ENST00000433774 331 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.86□□□□□ -2.55
TPM4P67936 RNU7-67P-201ENST00000459003 62 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 RNU7-66P-201ENST00000459469 62 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.86□□□□□ -2.55
TPM4P67936 MIR3672-201ENST00000584290 82 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.86□□□□□ -2.55
TPM4P67936 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 MIR215-201ENST00000384858 110 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 MIR501-201ENST00000390204 84 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.87□□□□□ -2.55
TPM4P67936 AC011352.1-201ENST00000512300 793 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.87□□□□□ -2.55
TPM4P67936 MIR4639-201ENST00000584938 69 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 AC018638.8-201ENST00000588755 281 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 AC245884.10-201ENST00000597355 337 ntBASIC-0.87□□□□□ -2.55
TPM4P67936 RNU7-73P-201ENST00000458743 63 ntBASIC-0.88□□□□□ -2.55
TPM4P67936 RNU7-116P-201ENST00000516940 62 ntBASIC-0.88□□□□□ -2.55
TPM4P67936 AC055872.1-201ENST00000570978 278 ntBASIC-0.88□□□□□ -2.55
TPM4P67936 Z69908.1-201ENST00000622603 247 ntBASIC-0.88□□□□□ -2.55
TPM4P67936 RNU6-874P-201ENST00000362390 105 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 SNORD93-201ENST00000408813 74 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 SNORD12B-201ENST00000410433 91 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 AC087499.4-201ENST00000448505 178 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 RNU6-408P-201ENST00000515910 100 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 RNU6-897P-201ENST00000517135 105 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 RNU2-60P-201ENST00000517290 128 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 AC006600.1-201ENST00000572529 153 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 POLR3GP1-201ENST00000594073 261 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 AC068137.3-201ENST00000639191 341 ntBASIC-0.89□□□□□ -2.55
TPM4P67936 SNORD116-11-201ENST00000383882 92 ntBASIC-0.9□□□□□ -2.55
TPM4P67936 AL603910.2-201ENST00000407268 136 ntBASIC-0.9□□□□□ -2.55
TPM4P67936 RN7SKP142-201ENST00000411236 328 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms