Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.04□□□□□ -1.92
NFKB1P19838 AL606517.2-201ENST00000442855 241 ntBASIC3.04□□□□□ -1.92
NFKB1P19838 AC091826.1-201ENST00000514065 313 ntBASIC3.04□□□□□ -1.92
NFKB1P19838 RNA5SP385-201ENST00000515947 110 ntBASIC3.04□□□□□ -1.92
NFKB1P19838 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.04□□□□□ -1.92
NFKB1P19838 SNORD115-40-201ENST00000606510 82 ntBASIC3.04□□□□□ -1.92
NFKB1P19838 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.04□□□□□ -1.92
NFKB1P19838 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
NFKB1P19838 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NFKB1P19838 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NFKB1P19838 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.03□□□□□ -1.92
NFKB1P19838 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
NFKB1P19838 RNA5SP493-201ENST00000364115 91 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 RNU6-461P-201ENST00000364195 107 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 MIR634-201ENST00000385208 97 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 MIR1912-201ENST00000410389 80 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.03□□□□□ -1.92
NFKB1P19838 RPL39P25-201ENST00000449384 154 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 AC078899.2-201ENST00000595282 212 ntBASIC3.03□□□□□ -1.92
NFKB1P19838 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
NFKB1P19838 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NFKB1P19838 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NFKB1P19838 AC073346.2-201ENST00000624724 2058 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
NFKB1P19838 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NFKB1P19838 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.02□□□□□ -1.93
NFKB1P19838 AL049873.1-201ENST00000480540 376 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 MIR3169-201ENST00000578032 83 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.02□□□□□ -1.93
NFKB1P19838 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.02□□□□□ -1.93
NFKB1P19838 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NFKB1P19838 AC008264.2-201ENST00000610193 3731 ntBASIC3.02□□□□□ -1.93
NFKB1P19838 AL035425.3-201ENST00000564206 4996 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 Y_RNA.107-201ENST00000363190 121 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 RNU6-816P-201ENST00000390914 107 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 RNU6-1268P-201ENST00000391214 107 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 RNU6-1239P-201ENST00000391310 107 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.01□□□□□ -1.93
NFKB1P19838 AP003327.1-201ENST00000529684 127 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 HSPE1P19-201ENST00000603327 295 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.01□□□□□ -1.93
NFKB1P19838 MIR3651-201ENST00000630427 90 ntBASIC3.01□□□□□ -1.93
NFKB1P19838 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NFKB1P19838 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NFKB1P19838 SNORA63D-201ENST00000364359 132 ntBASIC3□□□□□ -1.93
NFKB1P19838 RNU4-16P-201ENST00000364737 141 ntBASIC3□□□□□ -1.93
NFKB1P19838 Y_RNA.342-201ENST00000365352 113 ntBASIC3□□□□□ -1.93
NFKB1P19838 Y_RNA.466-201ENST00000384294 113 ntBASIC3□□□□□ -1.93
NFKB1P19838 SNORD38C-201ENST00000384381 69 ntBASIC3□□□□□ -1.93
NFKB1P19838 MIR1289-1-201ENST00000408836 144 ntBASIC3□□□□□ -1.93
NFKB1P19838 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
NFKB1P19838 RN7SKP12-201ENST00000516275 143 ntBASIC3□□□□□ -1.93
NFKB1P19838 RNU7-6P-201ENST00000516845 62 ntBASIC3□□□□□ -1.93
NFKB1P19838 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3□□□□□ -1.93
NFKB1P19838 U4atac.1-201ENST00000618345 95 ntBASIC3□□□□□ -1.93
NFKB1P19838 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NFKB1P19838 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
NFKB1P19838 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NFKB1P19838 RNU4-36P-201ENST00000364294 144 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 RNA5SP173-201ENST00000364857 136 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 RNA5SP109-201ENST00000391010 116 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 AL035398.1-201ENST00000430869 322 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 AC107297.1-201ENST00000459991 176 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 AC114811.1-201ENST00000507207 168 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 DEFB131E-201ENST00000532329 154 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
NFKB1P19838 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NFKB1P19838 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NFKB1P19838 AL442644.1-201ENST00000454390 3105 ntBASIC2.99□□□□□ -1.93
NFKB1P19838 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NFKB1P19838 MIR422A-201ENST00000362286 90 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 RNU6-23P-201ENST00000363283 107 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 SNORA27-201ENST00000384323 126 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 MIR450A2-201ENST00000385022 100 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 RN7SKP200-201ENST00000410564 320 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 RNA5SP144-201ENST00000410846 116 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.98□□□□□ -1.93
NFKB1P19838 SNX2P2-201ENST00000424553 323 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 AC104332.2-201ENST00000429959 156 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 STAG3L5P-204ENST00000443759 179 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.98□□□□□ -1.93
NFKB1P19838 AC005000.2-201ENST00000605468 310 ntBASIC2.98□□□□□ -1.93
NFKB1P19838 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.98□□□□□ -1.93
NFKB1P19838 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
NFKB1P19838 AL355596.1-201ENST00000565399 3996 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NFKB1P19838 MIR342-201ENST00000362212 99 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 RNY3P2-201ENST00000362918 102 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 RNU6-820P-201ENST00000384273 107 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 SNORA48.2-201ENST00000390926 124 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 RNU6-1275P-201ENST00000391087 107 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.97□□□□□ -1.93
NFKB1P19838 SNORA11.4-201ENST00000408823 129 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms