Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-60P-201ENST00000364792 103 ntBASIC1.79□□□□□ -2.12
MMP3P08254 Y_RNA.308-201ENST00000365043 101 ntBASIC1.79□□□□□ -2.12
MMP3P08254 RNU6-439P-201ENST00000384188 106 ntBASIC1.79□□□□□ -2.12
MMP3P08254 Y_RNA.552-201ENST00000384665 112 ntBASIC1.79□□□□□ -2.12
MMP3P08254 SNORA12.1-201ENST00000390873 148 ntBASIC1.79□□□□□ -2.12
MMP3P08254 SNORD58.1-201ENST00000391313 66 ntBASIC1.79□□□□□ -2.12
MMP3P08254 RNU6-493P-201ENST00000391321 108 ntBASIC1.79□□□□□ -2.12
MMP3P08254 MIR1298-201ENST00000408783 112 ntBASIC1.79□□□□□ -2.12
MMP3P08254 RNU7-34P-201ENST00000459394 64 ntBASIC1.79□□□□□ -2.12
MMP3P08254 RNU6-437P-201ENST00000459408 95 ntBASIC1.79□□□□□ -2.12
MMP3P08254 RNU7-116P-201ENST00000516940 62 ntBASIC1.79□□□□□ -2.12
MMP3P08254 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
MMP3P08254 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
MMP3P08254 ICE2P2-201ENST00000483823 2787 ntBASIC1.78□□□□□ -2.12
MMP3P08254 Y_RNA.24-201ENST00000362508 103 ntBASIC1.78□□□□□ -2.12
MMP3P08254 Y_RNA.257-201ENST00000364596 102 ntBASIC1.78□□□□□ -2.12
MMP3P08254 Y_RNA.304-201ENST00000365011 112 ntBASIC1.78□□□□□ -2.12
MMP3P08254 RNY4P28-201ENST00000365281 93 ntBASIC1.78□□□□□ -2.12
MMP3P08254 RNU6-440P-201ENST00000390882 105 ntBASIC1.78□□□□□ -2.12
MMP3P08254 RN7SKP101-201ENST00000411376 320 ntBASIC1.78□□□□□ -2.12
MMP3P08254 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.78□□□□□ -2.12
MMP3P08254 RNU7-94P-201ENST00000459576 63 ntBASIC1.78□□□□□ -2.12
MMP3P08254 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.78□□□□□ -2.12
MMP3P08254 AC100767.1-201ENST00000528178 123 ntBASIC1.78□□□□□ -2.12
MMP3P08254 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.78□□□□□ -2.12
MMP3P08254 AC009779.6-201ENST00000603972 165 ntBASIC1.78□□□□□ -2.12
MMP3P08254 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.78□□□□□ -2.12
MMP3P08254 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.78□□□□□ -2.12
MMP3P08254 MIR367-201ENST00000362299 68 ntBASIC1.77□□□□□ -2.13
MMP3P08254 Y_RNA.199-201ENST00000364014 102 ntBASIC1.77□□□□□ -2.13
MMP3P08254 Y_RNA.203-201ENST00000364106 102 ntBASIC1.77□□□□□ -2.13
MMP3P08254 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
MMP3P08254 RNU6-969P-201ENST00000383900 105 ntBASIC1.77□□□□□ -2.13
MMP3P08254 Y_RNA.515-201ENST00000384535 112 ntBASIC1.77□□□□□ -2.13
MMP3P08254 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MMP3P08254 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
MMP3P08254 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
MMP3P08254 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
MMP3P08254 AP002004.2-201ENST00000531656 154 ntBASIC1.77□□□□□ -2.13
MMP3P08254 AL591926.4-201ENST00000616895 298 ntBASIC1.77□□□□□ -2.13
MMP3P08254 AC141273.2-201ENST00000618989 130 ntBASIC1.77□□□□□ -2.13
MMP3P08254 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MMP3P08254 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.77□□□□□ -2.13
MMP3P08254 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
MMP3P08254 RNU6-653P-201ENST00000363074 106 ntBASIC1.76□□□□□ -2.13
MMP3P08254 Y_RNA.200-201ENST00000364018 102 ntBASIC1.76□□□□□ -2.13
MMP3P08254 RNY1-201ENST00000364228 113 ntBASIC1.76□□□□□ -2.13
MMP3P08254 RNU4-41P-201ENST00000364426 143 ntBASIC1.76□□□□□ -2.13
MMP3P08254 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
MMP3P08254 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
MMP3P08254 MLLT10P1-201ENST00000418346 262 ntBASIC1.76□□□□□ -2.13
MMP3P08254 AL049830.1-201ENST00000468034 425 ntBASIC1.76□□□□□ -2.13
MMP3P08254 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.76□□□□□ -2.13
MMP3P08254 RNU6-138P-201ENST00000515952 107 ntBASIC1.76□□□□□ -2.13
MMP3P08254 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
MMP3P08254 AL773524.1-201ENST00000614065 229 ntBASIC1.76□□□□□ -2.13
MMP3P08254 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MMP3P08254 MIR411-201ENST00000362239 96 ntBASIC1.75□□□□□ -2.13
MMP3P08254 Y_RNA.83-201ENST00000363005 113 ntBASIC1.75□□□□□ -2.13
MMP3P08254 SNORD68-201ENST00000363214 84 ntBASIC1.75□□□□□ -2.13
MMP3P08254 Y_RNA.116-201ENST00000363292 103 ntBASIC1.75□□□□□ -2.13
MMP3P08254 Y_RNA.796-201ENST00000364268 102 ntBASIC1.75□□□□□ -2.13
MMP3P08254 Y_RNA.799-201ENST00000364992 102 ntBASIC1.75□□□□□ -2.13
MMP3P08254 MIR518E-201ENST00000385252 88 ntBASIC1.75□□□□□ -2.13
MMP3P08254 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
MMP3P08254 snoU13.27-201ENST00000459278 104 ntBASIC1.75□□□□□ -2.13
MMP3P08254 RPL23AP91-201ENST00000569211 455 ntBASIC1.75□□□□□ -2.13
MMP3P08254 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
MMP3P08254 MIR4724-201ENST00000579485 89 ntBASIC1.75□□□□□ -2.13
MMP3P08254 Y_RNA.802-201ENST00000614892 130 ntBASIC1.75□□□□□ -2.13
MMP3P08254 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RNU6-1209P-201ENST00000363655 107 ntBASIC1.74□□□□□ -2.13
MMP3P08254 snoU2_19.4-201ENST00000364329 80 ntBASIC1.74□□□□□ -2.13
MMP3P08254 Y_RNA.262-201ENST00000364641 102 ntBASIC1.74□□□□□ -2.13
MMP3P08254 Y_RNA.297-201ENST00000364950 91 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RNU6-47P-201ENST00000383866 107 ntBASIC1.74□□□□□ -2.13
MMP3P08254 SNORA8.3-201ENST00000384679 139 ntBASIC1.74□□□□□ -2.13
MMP3P08254 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MMP3P08254 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MMP3P08254 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RNU11-5P-201ENST00000391216 129 ntBASIC1.74□□□□□ -2.13
MMP3P08254 COX6CP10-201ENST00000416832 224 ntBASIC1.74□□□□□ -2.13
MMP3P08254 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.74□□□□□ -2.13
MMP3P08254 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
MMP3P08254 MTND5P15-201ENST00000434246 349 ntBASIC1.74□□□□□ -2.13
MMP3P08254 Z98949.2-201ENST00000440996 144 ntBASIC1.74□□□□□ -2.13
MMP3P08254 AC245517.4-201ENST00000448601 281 ntBASIC1.74□□□□□ -2.13
MMP3P08254 AC245047.8-201ENST00000456455 284 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
MMP3P08254 RNU6-1116P-201ENST00000517269 99 ntBASIC1.74□□□□□ -2.13
MMP3P08254 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
MMP3P08254 MIR4308-201ENST00000580634 81 ntBASIC1.74□□□□□ -2.13
MMP3P08254 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MMP3P08254 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MMP3P08254 MIR626-201ENST00000385032 94 ntBASIC1.73□□□□□ -2.13
MMP3P08254 MT-TT-201ENST00000387460 66 ntBASIC1.73□□□□□ -2.13
MMP3P08254 AC009310.1-201ENST00000414414 451 ntBASIC1.73□□□□□ -2.13
MMP3P08254 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
MMP3P08254 SNRPGP10-201ENST00000432323 225 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms