Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 UBE2WP1-201ENST00000362030 340 ntBASIC1.35□□□□□ -2.19
TO15178 RNU6-1272P-201ENST00000362776 107 ntBASIC1.35□□□□□ -2.19
TO15178 Y_RNA.149-201ENST00000363558 117 ntBASIC1.35□□□□□ -2.19
TO15178 RNU6-1205P-201ENST00000363625 106 ntBASIC1.35□□□□□ -2.19
TO15178 snoU2-30.1-201ENST00000365012 70 ntBASIC1.35□□□□□ -2.19
TO15178 RNU6-662P-201ENST00000384253 104 ntBASIC1.35□□□□□ -2.19
TO15178 MIR653-201ENST00000385279 96 ntBASIC1.35□□□□□ -2.19
TO15178 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
TO15178 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
TO15178 SNORD45.4-201ENST00000516629 73 ntBASIC1.35□□□□□ -2.19
TO15178 AC087685.1-201ENST00000587507 141 ntBASIC1.35□□□□□ -2.19
TO15178 AC005357.1-201ENST00000588399 301 ntBASIC1.35□□□□□ -2.19
TO15178 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TO15178 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TO15178 MIR335-201ENST00000362173 94 ntBASIC1.34□□□□□ -2.19
TO15178 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
TO15178 Y_RNA.217-201ENST00000364214 105 ntBASIC1.34□□□□□ -2.19
TO15178 RNU6-969P-201ENST00000383900 105 ntBASIC1.34□□□□□ -2.19
TO15178 Y_RNA.461-201ENST00000384263 103 ntBASIC1.34□□□□□ -2.19
TO15178 MTND2P23-201ENST00000422990 651 ntBASIC1.34□□□□□ -2.19
TO15178 AL358176.2-201ENST00000425769 204 ntBASIC1.34□□□□□ -2.19
TO15178 BTF3P11-201ENST00000426582 477 ntBASIC1.34□□□□□ -2.19
TO15178 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
TO15178 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
TO15178 Y_RNA.641-201ENST00000459414 105 ntBASIC1.34□□□□□ -2.19
TO15178 RNU6-1045P-201ENST00000516321 107 ntBASIC1.34□□□□□ -2.19
TO15178 RNU6-1007P-201ENST00000516586 107 ntBASIC1.34□□□□□ -2.19
TO15178 AC090049.2-201ENST00000550377 109 ntBASIC1.34□□□□□ -2.19
TO15178 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
TO15178 MIR5692C2-201ENST00000577959 77 ntBASIC1.34□□□□□ -2.19
TO15178 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
TO15178 AP001282.2-201ENST00000616149 309 ntBASIC1.34□□□□□ -2.19
TO15178 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.34□□□□□ -2.19
TO15178 Y_RNA.47-201ENST00000362697 108 ntBASIC1.33□□□□□ -2.2
TO15178 RNU6-1209P-201ENST00000363655 107 ntBASIC1.33□□□□□ -2.2
TO15178 Y_RNA.796-201ENST00000364268 102 ntBASIC1.33□□□□□ -2.2
TO15178 Y_RNA.237-201ENST00000364439 102 ntBASIC1.33□□□□□ -2.2
TO15178 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
TO15178 Y_RNA.799-201ENST00000364992 102 ntBASIC1.33□□□□□ -2.2
TO15178 MIR452-201ENST00000385020 85 ntBASIC1.33□□□□□ -2.2
TO15178 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
TO15178 AL451046.2-201ENST00000403074 277 ntBASIC1.33□□□□□ -2.2
TO15178 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
TO15178 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.33□□□□□ -2.2
TO15178 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
TO15178 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
TO15178 Y_RNA.44-201ENST00000362676 108 ntBASIC1.32□□□□□ -2.2
TO15178 SNORD50B-201ENST00000364995 70 ntBASIC1.32□□□□□ -2.2
TO15178 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
TO15178 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
TO15178 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.32□□□□□ -2.2
TO15178 RNU6-917P-201ENST00000516294 104 ntBASIC1.32□□□□□ -2.2
TO15178 RNU6-922P-201ENST00000516753 99 ntBASIC1.32□□□□□ -2.2
TO15178 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
TO15178 RPL23AP91-201ENST00000569211 455 ntBASIC1.32□□□□□ -2.2
TO15178 AP000942.3-201ENST00000603702 160 ntBASIC1.32□□□□□ -2.2
TO15178 snoU18.1-201ENST00000629629 71 ntBASIC1.32□□□□□ -2.2
TO15178 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TO15178 RNU6-1309P-201ENST00000363305 108 ntBASIC1.31□□□□□ -2.2
TO15178 SNORD14E-201ENST00000364009 85 ntBASIC1.31□□□□□ -2.2
TO15178 Y_RNA.242-201ENST00000364473 110 ntBASIC1.31□□□□□ -2.2
TO15178 Y_RNA.275-201ENST00000364726 110 ntBASIC1.31□□□□□ -2.2
TO15178 Y_RNA.293-201ENST00000364908 93 ntBASIC1.31□□□□□ -2.2
TO15178 MT-TW-201ENST00000387382 68 ntBASIC1.31□□□□□ -2.2
TO15178 MIR1298-201ENST00000408783 112 ntBASIC1.31□□□□□ -2.2
TO15178 AC023449.1-201ENST00000454464 154 ntBASIC1.31□□□□□ -2.2
TO15178 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.31□□□□□ -2.2
TO15178 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
TO15178 MTCO2P24-201ENST00000515611 426 ntBASIC1.31□□□□□ -2.2
TO15178 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TO15178 Y_RNA.483-201ENST00000384380 101 ntBASIC1.3□□□□□ -2.2
TO15178 RNU6-1289P-201ENST00000384431 106 ntBASIC1.3□□□□□ -2.2
TO15178 MIR802-201ENST00000390235 94 ntBASIC1.3□□□□□ -2.2
TO15178 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TO15178 MIR1302-3-201ENST00000408128 138 ntBASIC1.3□□□□□ -2.2
TO15178 MIR1278-201ENST00000408753 81 ntBASIC1.3□□□□□ -2.2
TO15178 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
TO15178 AC108667.1-201ENST00000428618 249 ntBASIC1.3□□□□□ -2.2
TO15178 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.3□□□□□ -2.2
TO15178 FAM106DP-201ENST00000586416 501 ntBASIC1.3□□□□□ -2.2
TO15178 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
TO15178 AL353621.2-201ENST00000605340 133 ntBASIC1.3□□□□□ -2.2
TO15178 AL512598.1-201ENST00000610158 273 ntBASIC1.3□□□□□ -2.2
TO15178 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
TO15178 MIR367-201ENST00000362299 68 ntBASIC1.29□□□□□ -2.2
TO15178 Y_RNA.14-201ENST00000362415 103 ntBASIC1.29□□□□□ -2.2
TO15178 RNU6-472P-201ENST00000384299 107 ntBASIC1.29□□□□□ -2.2
TO15178 Y_RNA.518-201ENST00000384552 113 ntBASIC1.29□□□□□ -2.2
TO15178 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
TO15178 Y_RNA.556-201ENST00000384677 113 ntBASIC1.29□□□□□ -2.2
TO15178 MIR526A1-201ENST00000384897 85 ntBASIC1.29□□□□□ -2.2
TO15178 RNA5SP496-201ENST00000391240 109 ntBASIC1.29□□□□□ -2.2
TO15178 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
TO15178 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.29□□□□□ -2.2
TO15178 AL603825.1-201ENST00000438481 80 ntBASIC1.29□□□□□ -2.2
TO15178 Y_RNA.676-201ENST00000516393 96 ntBASIC1.29□□□□□ -2.2
TO15178 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
TO15178 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.29□□□□□ -2.2
TO15178 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
TO15178 MIR4724-201ENST00000579485 89 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms