Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR625-201ENST00000385047 85 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 U8.15-201ENST00000390947 134 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 RPL30P16-201ENST00000419341 429 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 MTND2P18-201ENST00000419962 1030 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 HMGN1P33-201ENST00000432945 451 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 GPR143P-201ENST00000434155 205 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 AL445193.1-201ENST00000441183 141 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 RPL39P25-201ENST00000449384 154 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU7-161P-201ENST00000517289 62 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR6779-201ENST00000617283 64 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 AC099654.12-201ENST00000639868 649 ntBASIC-1.48□□□□□ -2.65
CHKB-CPT1BH3BT56 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR1265-201ENST00000408444 86 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 AC096949.1-201ENST00000412047 152 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 MTATP6P20-201ENST00000414147 562 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 RN7SKP19-201ENST00000516016 252 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU7-188P-201ENST00000517063 64 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 AL137161.1-201ENST00000532231 390 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 AC011458.1-201ENST00000604034 617 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 AC011373.1-201ENST00000607270 237 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 AC109347.2-201ENST00000610220 349 ntBASIC-1.49□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-454P-201ENST00000364292 107 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORA72.6-201ENST00000384520 129 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 Vault.3-201ENST00000516676 95 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-958P-201ENST00000516995 106 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR4423-201ENST00000580922 80 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR4280-201ENST00000582178 76 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 AC073648.5-201ENST00000603502 305 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 AC018462.2-201ENST00000605375 395 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR6851-201ENST00000617060 67 ntBASIC-1.5□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-660P-201ENST00000364566 109 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORA72-201ENST00000384339 132 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD56B-201ENST00000384713 71 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 AL391834.2-201ENST00000609982 546 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 AL133173.2-201ENST00000614270 90 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 AL391262.2-201ENST00000622466 494 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 AL163152.1-201ENST00000642001 374 ntBASIC-1.51□□□□□ -2.65
CHKB-CPT1BH3BT56 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-34-201ENST00000362441 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-12-201ENST00000362583 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-29-201ENST00000362834 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-9-201ENST00000362912 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-21-201ENST00000362963 81 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-14-201ENST00000363090 81 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-13-201ENST00000363358 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORA63.5-201ENST00000363548 123 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-41-201ENST00000363608 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-11-201ENST00000363616 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-5-201ENST00000363633 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-39-201ENST00000363694 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-4-201ENST00000363810 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-16-201ENST00000363887 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-6-201ENST00000363942 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-42-201ENST00000364273 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU4-75P-201ENST00000364621 146 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-15-201ENST00000364809 81 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-1-201ENST00000364961 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-26-201ENST00000365067 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-10-201ENST00000365073 81 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-43-201ENST00000365503 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-108P-201ENST00000365558 107 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-36-201ENST00000365629 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU2-29P-201ENST00000410423 189 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNA5SP25-201ENST00000410815 110 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 AC244505.6-201ENST00000452829 130 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU7-104P-201ENST00000459398 79 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-966P-201ENST00000516479 104 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 SNORD115-40-201ENST00000606510 82 ntBASIC-1.52□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR1-2-201ENST00000384961 85 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 RNA5SP484-201ENST00000458857 111 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 MTCO1P29-201ENST00000496868 288 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 MIR5583-1-201ENST00000580941 59 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 TUSC7.1-201ENST00000610969 165 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 AL662814.1-201ENST00000617364 121 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 RNU6-489P-201ENST00000618289 107 ntBASIC-1.53□□□□□ -2.65
CHKB-CPT1BH3BT56 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-865P-201ENST00000364772 107 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-10P-201ENST00000384036 107 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 RNY3P5-201ENST00000384127 102 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 RNU6-281P-201ENST00000384212 103 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 AC134698.4-201ENST00000523451 826 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 AC008507.4-201ENST00000585464 127 ntBASIC-1.54□□□□□ -2.66
CHKB-CPT1BH3BT56 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 384.5 ms