Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MTND3P21-201ENST00000433774 331 ntBASIC0.03□□□□□ -2.4
RHBDD3Q9Y3P4 SCARNA8-201ENST00000515924 131 ntBASIC0.03□□□□□ -2.4
RHBDD3Q9Y3P4 MIR4804-201ENST00000581683 73 ntBASIC0.03□□□□□ -2.4
RHBDD3Q9Y3P4 AC004467.1-201ENST00000615678 330 ntBASIC0.03□□□□□ -2.4
RHBDD3Q9Y3P4 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
RHBDD3Q9Y3P4 RNA5SP517-201ENST00000364724 117 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-442P-201ENST00000383968 104 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-780P-201ENST00000391030 104 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 AC074085.1-201ENST00000413598 418 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MTND1P1-201ENST00000445453 368 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 CHEK2P4-201ENST00000450340 246 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 EIF1P4-201ENST00000572664 335 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 AC063944.3-201ENST00000609969 533 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 Pinc.1-201ENST00000616452 154 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 AC078938.1-201ENST00000620993 318 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
RHBDD3Q9Y3P4 Y_RNA.38-201ENST00000362617 102 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-593P-201ENST00000364716 112 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNA5SP127-201ENST00000411051 133 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC093534.1-201ENST00000504977 132 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 MIR548AO-201ENST00000579992 96 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC018462.2-201ENST00000605375 395 ntBASIC0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-874P-201ENST00000362390 105 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1301P-201ENST00000362724 104 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 Y_RNA.85-201ENST00000363014 111 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 MIR1197-201ENST00000408818 88 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 AL353997.1-201ENST00000432936 108 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 RNU4-77P-201ENST00000516692 156 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1314P-201ENST00000517139 104 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 RPL23AP91-201ENST00000569211 455 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4771-2-201ENST00000577758 74 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4771-1-201ENST00000582617 74 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 uc_338.4-201ENST00000616635 176 ntBASIC0□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 SNORA63C-201ENST00000364578 129 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-192P-201ENST00000391253 100 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 U8.17-201ENST00000391292 132 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD100-201ENST00000408573 76 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNA5SP118-201ENST00000410385 109 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-408P-201ENST00000515910 100 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-273P-201ENST00000516937 96 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 RNU7-116P-201ENST00000516940 62 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC069113.3-201ENST00000521019 150 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC109635.3-201ENST00000529536 185 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 SNORA25.18-201ENST00000607153 114 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC090617.10-201ENST00000624308 134 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 AC024614.3-201ENST00000637860 256 ntBASIC-0.01□□□□□ -2.41
RHBDD3Q9Y3P4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD116-9-201ENST00000384000 95 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD116-3-201ENST00000384287 95 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD116-7-201ENST00000384404 95 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD116-5-201ENST00000384462 95 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR570-201ENST00000384917 97 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR7-2-201ENST00000384970 110 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR802-201ENST00000390235 94 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 AC073261.1-201ENST00000429409 121 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 RNU7-56P-201ENST00000458744 62 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4676-201ENST00000583078 72 ntBASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.02□□□□□ -2.41
RHBDD3Q9Y3P4 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD118-201ENST00000363593 134 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNA5SP457-201ENST00000363657 124 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD45.3-201ENST00000363836 72 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MIR938-201ENST00000401216 83 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MTCO2P33-201ENST00000402100 465 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-710P-201ENST00000410424 105 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-847P-201ENST00000411115 108 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MTCO2P27-201ENST00000420740 428 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNU6-307P-201ENST00000516743 106 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNA5SP94-201ENST00000516917 108 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 RNA5SP330-201ENST00000517096 96 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4790-201ENST00000577799 79 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 AC005899.2-201ENST00000584353 90 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MIR4791-201ENST00000607666 84 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MIR6779-201ENST00000617283 64 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 AP000770.2-201ENST00000623694 100 ntBASIC-0.03□□□□□ -2.41
RHBDD3Q9Y3P4 MTND1P7-201ENST00000632801 297 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms