Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 MIR3668-201ENST00000582138 75 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 AC022217.4-201ENST00000604389 163 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SMARCAL1Q9NZC9 MIR411-201ENST00000362239 96 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-493P-201ENST00000391321 108 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 MIR1289-2-201ENST00000408360 111 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 MIR1278-201ENST00000408753 81 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 RPS27P1-201ENST00000450552 247 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 RNU7-116P-201ENST00000516940 62 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.74□□□□□ -2.13
SMARCAL1Q9NZC9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-47P-201ENST00000383866 107 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 SNORA72-201ENST00000384339 132 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 AC100767.1-201ENST00000528178 123 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SMARCAL1Q9NZC9 AC100821.1-201ENST00000523153 2479 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 AC245047.3-201ENST00000429428 127 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 MTND2P29-201ENST00000438595 412 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-437P-201ENST00000459408 95 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 COX6CP14-201ENST00000469580 174 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 RNU6-341P-201ENST00000516973 96 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 MIR4308-201ENST00000580634 81 ntBASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
SMARCAL1Q9NZC9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 SNORA4.2-201ENST00000365313 147 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-969P-201ENST00000383900 105 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-144P-201ENST00000383951 107 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 SNORA8.3-201ENST00000384679 139 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 MIR626-201ENST00000385032 94 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 AC022559.1-201ENST00000520905 205 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 MIR4724-201ENST00000579485 89 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMARCAL1Q9NZC9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-296P-201ENST00000384608 107 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 RN7SKP101-201ENST00000411376 320 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 COX6CP10-201ENST00000416832 224 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 RNU7-94P-201ENST00000459576 63 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
SMARCAL1Q9NZC9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 MIR367-201ENST00000362299 68 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-482P-201ENST00000391068 107 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNU11-5P-201ENST00000391216 129 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNA5SP212-201ENST00000391223 107 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNU2-7P-201ENST00000410794 178 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 AL049830.1-201ENST00000468034 425 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 SNORA31.10-201ENST00000516482 106 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-453P-201ENST00000516819 85 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 SNORA81.3-201ENST00000517283 198 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 CBX3P4-201ENST00000538909 354 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 MIR8054-201ENST00000620877 86 ntBASIC1.69□□□□□ -2.14
SMARCAL1Q9NZC9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SMARCAL1Q9NZC9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SMARCAL1Q9NZC9 RNU6-674P-201ENST00000363831 107 ntBASIC1.68□□□□□ -2.14
SMARCAL1Q9NZC9 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
SMARCAL1Q9NZC9 RNU4-17P-201ENST00000365598 141 ntBASIC1.68□□□□□ -2.14
SMARCAL1Q9NZC9 MIR520A-201ENST00000384862 85 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms